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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | EcE24377A_3116 (csdA) | 3123414..3124619 [+], 1206 | 157156888 | cysteine sulfinate desulfinase | |
2 | EcE24377A_3117 (csdE) | 3124619..3125062 [+], 444 | 157158642 | cysteine desulfuration protein CsdE | |
3 | EcE24377A_3118 | 3125113..3125919 [-], 807 | 157158275 | ThiF family protein | |
4 | EcE24377A_3119 (mltA) | 3125996..3127093 [-], 1098 | 157155153 | murein transglycosylase A | |
5 | EcE24377A_3123 | 3128230..3128730 [+], 501 | 157154801 | hypothetical protein | TssB |
6 | EcE24377A_3124 | 3128789..3130327 [+], 1539 | 157155143 | hypothetical protein | TssC |
7 | EcE24377A_3125 | 3130345..3131682 [+], 1338 | 157155664 | hypothetical protein | TssK |
8 | EcE24377A_3126 | 3131679..3132344 [+], 666 | 157156380 | DotU family type IV/VI secretion system protein | TssL |
9 | EcE24377A_3127 | 3132357..3134009 [+], 1653 | 157156833 | OmpA domain-containing protein | TagL |
10 | EcE24377A_3128 | 3134067..3134558 [+], 492 | 157157465 | hypothetical protein | TssD |
11 | EcE24377A_3129 | 3134749..3137394 [+], 2646 | 157155408 | ClpA/ClpB family protein | TssH |
12 | EcE24377A_3130 | 3137406..3139913 [+], 2508 | 157158477 | ImpA family type VI secretion-associated protein | TssI |
13 | EcE24377A_3131 | 3139935..3140537 [+], 603 | 157158177 | hypothetical protein | |
14 | EcE24377A_3132 | 3140539..3141090 [+], 552 | 157157411 | hypothetical protein | |
15 | EcE24377A_3133 | 3141298..3141681 [+], 384 | 157159449 | type VI secretion lipoprotein | TssJ |
16 | EcE24377A_3134 | 3141685..3142113 [+], 429 | 157158774 | hypothetical protein | TssE |
17 | EcE24377A_3135 | 3142113..3143489 [+], 1377 | 157156697 | ImpA-related N-terminal domain-containing protein | TssA |
18 | EcE24377A_3136 | 3143554..3144102 [+], 549 | 157158496 | hypothetical protein | |
19 | EcE24377A_3137 (amiC) | 3144448..3145701 [-], 1254 | 157157803 | N-acetylmuramoyl-L-alanine amidase | |
20 | EcE24377A_3138 (argA) | 3145933..3147264 [+], 1332 | 157156402 | N-acetylglutamate synthase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein