 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Spro_1779 | 1954180..1954581 [-], 402 | 157370022 | hypothetical protein | |
2 | Spro_1780 | 1954913..1956346 [+], 1434 | 157370023 | hypothetical protein | |
3 | Spro_1781 | 1956779..1957375 [+], 597 | 157370024 | hypothetical protein | |
4 | Spro_1783 | 1958949..1959446 [+], 498 | 157370025 | hypothetical protein | TssB |
5 | Spro_1784 | 1959481..1961028 [+], 1548 | 157370026 | hypothetical protein | TssC |
6 | Spro_1785 | 1961045..1962385 [+], 1341 | 157370027 | hypothetical protein | TssK |
7 | Spro_1786 | 1962382..1963071 [+], 690 | 157370028 | hypothetical protein | TssL |
8 | Spro_1787 | 1963068..1964777 [+], 1710 | 157370029 | OmpA/MotB domain-containing protein | TagL |
9 | Spro_1788 | 1964781..1965272 [+], 492 | 157370030 | hypothetical protein | TssD |
10 | Spro_1789 | 1965445..1968099 [+], 2655 | 157370031 | ATPase | TssH |
11 | Spro_1790 | 1968619..1970997 [+], 2379 | 157370032 | Rhs element Vgr protein | TssI |
12 | Spro_1791 | 1971004..1971783 [+], 780 | 157370033 | hypothetical protein | |
13 | Spro_1792 | 1971895..1972428 [+], 534 | 157370034 | hypothetical protein | |
14 | Spro_1793 | 1972537..1973070 [+], 534 | 157370035 | hypothetical protein | |
15 | Spro_1794 | 1973179..1973691 [+], 513 | 157370036 | hypothetical protein | |
16 | Spro_1795 | 1973679..1976126 [+], 2448 | 157370037 | hypothetical protein | |
17 | Spro_1796 | 1976145..1976402 [+], 258 | 157370038 | PAAR repeat-containing protein | PAAR |
18 | Spro_1797 | 1976576..1977538 [+], 963 | 157370039 | hypothetical protein | |
19 | Spro_1798 | 1977765..1980968 [+], 3204 | 157370040 | ImcF domain-containing protein | TssM |
20 | Spro_1799 | 1980968..1982560 [+], 1593 | 157370041 | ImpA domain-containing protein | TssA |
21 | Spro_1800 | 1982588..1984342 [+], 1755 | 157370042 | hypothetical protein | TssF |
22 | Spro_1801 | 1984306..1985391 [+], 1086 | 157370043 | hypothetical protein | TssG |
23 | Spro_1802 | 1985369..1985914 [+], 546 | 157370044 | hypothetical protein | TssJ |
24 | Spro_1803 | 1985914..1986363 [+], 450 | 157370045 | GPW/gp25 family protein | TssE |
25 | Spro_1804 | 1986614..1988005 [+], 1392 | 157370046 | ImpA domain-containing protein | TssA |
26 | Spro_1805 | 1988172..1990166 [-], 1995 | 157370047 | choline/carnitine/betaine transporter | |
27 | Spro_1806 | 1990629..1990844 [+], 216 | 157370048 | hypothetical protein | |
28 | Spro_1807 | 1990952..1992361 [-], 1410 | 157370049 | gluconate 2-dehydrogenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein