 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | SARI_02702 | 2614228..2614950 [+], 723 | 161504588 | hypothetical protein | |
2 | SARI_02703 | 2615112..2615519 [+], 408 | 161504589 | hypothetical protein | |
3 | SARI_02704 | 2615563..2615763 [-], 201 | 161504590 | hypothetical protein | |
4 | SARI_02705 | 2615945..2616184 [+], 240 | 161504591 | hypothetical protein | |
5 | SARI_02706 | 2616493..2617257 [+], 765 | 161504592 | adhesin/invasin PagN | |
6 | SARI_02707 | 2617493..2617657 [-], 165 | 161504593 | hypothetical protein | |
7 | SARI_02708 | 2617664..2618065 [+], 402 | 161504594 | hypothetical protein | |
8 | SARI_02709 | 2618086..2619468 [-], 1383 | 161504595 | hypothetical protein | TssA |
9 | SARI_02710 | 2619515..2620759 [-], 1245 | 161504596 | hypothetical protein | |
10 | SARI_02711 | 2621574..2621828 [-], 255 | 161504597 | hypothetical protein | |
11 | SARI_02712 | 2621843..2622295 [-], 453 | 161504598 | hypothetical protein | TssE |
12 | SARI_02713 | 2622288..2622830 [-], 543 | 161504599 | hypothetical protein | TssJ |
13 | SARI_02714 | 2622805..2623908 [-], 1104 | 161504600 | hypothetical protein | TssG |
14 | SARI_02715 | 2623863..2625626 [-], 1764 | 161504601 | hypothetical protein | TssF |
15 | SARI_02716 | 2625648..2626178 [-], 531 | 161504602 | hypothetical protein | |
16 | SARI_02717 | 2626241..2626972 [-], 732 | 161504603 | hypothetical protein | |
17 | SARI_02718 | 2627003..2627488 [-], 486 | 161504604 | hypothetical protein | |
18 | SARI_02719 | 2627615..2628598 [-], 984 | 161504605 | hypothetical protein | TssA |
19 | SARI_02720 | 2628598..2632005 [-], 3408 | 161504606 | hypothetical protein | TssM |
20 | SARI_02721 | 2631992..2633149 [-], 1158 | 161504607 | hypothetical protein | |
21 | SARI_02722 | 2633449..2634303 [-], 855 | 161504608 | hypothetical protein | |
22 | SARI_02723 | 2634309..2636534 [-], 2226 | 161504609 | hypothetical protein | |
23 | SARI_02724 | 2636579..2639092 [-], 2514 | 161504610 | hypothetical protein | TssI |
24 | SARI_02725 | 2639170..2639379 [-], 210 | 161504611 | hypothetical protein | |
25 | SARI_02726 | 2639397..2639861 [-], 465 | 161504612 | hypothetical protein | |
26 | SARI_02727 | 2639855..2640424 [-], 570 | 161504613 | hypothetical protein | |
27 | SARI_02728 | 2640439..2643033 [-], 2595 | 161504614 | hypothetical protein | TssH |
28 | SARI_02729 | 2643250..2643756 [-], 507 | 161504615 | hypothetical protein | TssD |
29 | SARI_02730 | 2643746..2645470 [-], 1725 | 161504616 | hypothetical protein | TagL |
30 | SARI_02731 | 2645474..2646124 [-], 651 | 161504617 | hypothetical protein | TssL |
31 | SARI_02732 | 2646121..2647458 [-], 1338 | 161504618 | hypothetical protein | TssK |
32 | SARI_02733 | 2647477..2649024 [-], 1548 | 161504619 | hypothetical protein | TssC |
33 | SARI_02734 | 2649059..2649595 [-], 537 | 161504620 | hypothetical protein | TssB |
34 | SARI_02735 | 2650194..2650556 [-], 363 | 161504621 | hypothetical protein | |
35 | SARI_02736 | 2650632..2651483 [+], 852 | 161504622 | hypothetical protein | |
36 | SARI_02738 | 2651835..2652575 [-], 741 | 161504623 | DNA polymerase III subunit epsilon | |
37 | SARI_02739 (rnhA) | 2652630..2653097 [+], 468 | 161504624 | ribonuclease H | |
38 | SARI_02740 | 2653094..2653816 [-], 723 | 161504625 | hypothetical protein | |
39 | SARI_02741 | 2653851..2654606 [+], 756 | 161504626 | hydroxyacylglutathione hydrolase | |
40 | SARI_02742 (mltD) | 2654678..2656045 [+], 1368 | 161504627 | membrane-bound lytic murein transglycosylase D | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein