I. Summary
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 0 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | STY0276 (dkgB) | 292894..293697 [+], 804 | 16759241 | 2,5-diketo-D-gluconate reductase B | |
2 | STY0277 (yafC) | 293718..294632 [-], 915 | 16759242 | transcriptional regulator | |
3 | STY0278 | 294737..295912 [+], 1176 | 16759243 | drug efflux protein | |
4 | STY0279 (yafD) | 296065..296844 [+], 780 | 16759244 | hypothetical protein | |
5 | STY0280 (yafE) | 296922..297692 [+], 771 | 16759245 | methyltransferase | |
6 | STY0281 (mltD) | 297748..299115 [-], 1368 | 16759246 | membrane-bound lytic murein transglycosylase D | |
7 | STY0282 (gloB) | 299187..299942 [-], 756 | 16759247 | hydroxyacylglutathione hydrolase | |
8 | STY0283 | 299977..300699 [+], 723 | 16759248 | hypothetical protein | |
9 | STY0284 (rnhA) | 300696..301163 [-], 468 | 16759249 | ribonuclease H | |
10 | STY0285 (dnaQ) | 301227..301958 [+], 732 | 16759250 | DNA polymerase III subunit epsilon | |
11 | STY0286 | 302488..303120 [-], 633 | 16759251 | hypothetical protein | TssA |
12 | STY0287 | 303120..303542 [-], 423 | 16759252 | hypothetical protein | TssA |
13 | STY0288 | 303553..304548 [-], 996 | 16759253 | hypothetical protein | TssG |
14 | STY0289 | 304545..306428 [-], 1884 | 16759254 | hypothetical protein | TssF |
15 | STY0290 | 306444..306938 [-], 495 | 16759255 | hypothetical protein | TssE |
16 | STY0291 | 306935..307759 [-], 825 | 16759256 | hypothetical protein | TagJ |
17 | STY0292 | 307746..308648 [-], 903 | 16759257 | hypothetical protein | |
18 | STY0294 | 309016..311679 [+], 2664 | 16759259 | ClpB-like protein | TssH |
19 | STY0295 | 311664..311762 [+], 99 | 16759260 | hypothetical protein | |
20 | STY0296 | 311765..312055 [+], 291 | 16759261 | hypothetical protein | |
21 | STY0297 | 312119..312661 [+], 543 | 16759262 | hypothetical protein | TssB |
22 | STY0300 | 314246..314647 [+], 402 | 16759263 | hypothetical protein | STY0300 (e) |
23 | STY0301 | 314619..315044 [+], 426 | 16759264 | hypothetical protein | STY0301 (i) |
24 | STY0302 | 315281..315766 [+], 486 | 16759265 | hypothetical protein | TssD |
25 | STY0303 | 315833..316369 [+], 537 | 16759266 | lipoprotein | TssJ |
26 | STY0304 | 316373..317716 [+], 1344 | 16759267 | hypothetical protein | TssK |
27 | STY0305 | 317713..319014 [+], 1302 | 16759268 | hypothetical protein | TssL |
28 | STY0306 | 319019..319768 [+], 750 | 16759269 | hypothetical protein | |
29 | STY0307 | 319800..320294 [+], 495 | 16759270 | hypothetical protein | |
30 | STY0310 | 324392..325159 [+], 768 | 16759271 | hypothetical protein | |
31 | STY0311 | 325202..325672 [+], 471 | 16759272 | hypothetical protein | |
32 | STY0312 | 325657..326130 [+], 474 | 16759273 | hypothetical protein | |
33 | STY0313 | 326234..326704 [+], 471 | 16759274 | hypothetical protein | |
34 | STY0314 | 326689..327150 [+], 462 | 16759275 | hypothetical protein | |
35 | STY0316 | 327278..327694 [+], 417 | 16759276 | hypothetical protein | |
36 | STY0317 | 327721..328158 [+], 438 | 16759277 | hypothetical protein | |
37 | STY0318 | 328166..328273 [+], 108 | 16759278 | hypothetical protein | |
38 | STY0319 | 328636..330825 [+], 2190 | 16759279 | Rhs-family protein | TssI |
39 | STY0320 | 330849..331295 [+], 447 | 16759280 | hypothetical protein | |
40 | STY0321 | 331314..335378 [+], 4065 | 16759281 | Rhs-family protein | PAAR |
41 | STY0322 | 335381..336058 [+], 678 | 16759282 | hypothetical protein | |
42 | STY0323 | 336077..336370 [+], 294 | 16759283 | hypothetical protein | |
43 | STY0324 | 336466..338997 [+], 2532 | 16759284 | Rhs-family protein | |
44 | STY0326 | 339076..339336 [+], 261 | 16759285 | hypothetical protein | |
45 | STY0327 | 339338..339781 [+], 444 | 16759286 | hypothetical protein | |
46 | STY0328 | 339851..340156 [-], 306 | 16759287 | hypothetical protein | |
|

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.