 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | sce4976 | 6992587..6993144 [-], 558 | 162453252 | hypothetical protein | |
2 | sce4977 (queA2) | 6993358..6994383 [-], 1026 | 162453253 | S-adenosylmethionine--tRNA ribosyltransferase-isomerase | |
3 | sce4978 | 6994380..6995192 [-], 813 | 162453254 | oxidoreductase | |
4 | sce4979 | 6995283..6995843 [+], 561 | 162453255 | DNA-binding protein | |
5 | sce4980 | 6995880..6996593 [-], 714 | 162453256 | hypothetical protein | |
6 | sce4981 | 6996626..6998110 [-], 1485 | 162453257 | hypothetical protein | TssC |
7 | sce4982 | 6998114..6998605 [-], 492 | 162453258 | hypothetical protein | TssB |
8 | sce4983 | 6998778..7000466 [-], 1689 | 162453259 | hypothetical protein | TssA |
9 | sce4984 | 7000653..7001627 [-], 975 | 162453260 | hypothetical protein | |
10 | sce4985 | 7002168..7005884 [-], 3717 | 162453261 | hypothetical protein | TssM |
11 | sce4986 | 7005926..7006603 [-], 678 | 162453262 | hypothetical protein | TssL |
12 | sce4987 | 7006638..7007999 [-], 1362 | 162453263 | hypothetical protein | TssK |
13 | sce4988 | 7008181..7008972 [-], 792 | 162453264 | hypothetical protein | TssJ |
14 | sce4989 (clpA) | 7009076..7011781 [-], 2706 | 162453265 | endopeptidase Clp | TssH |
15 | sce4990 (mltD3) | 7011818..7013689 [-], 1872 | 162453266 | Slt family transglycosylase | |
16 | sce4991 | 7013910..7015202 [+], 1293 | 162453267 | FHA domain-containing protein | Fha |
17 | sce4992 | 7015293..7015985 [+], 693 | 162453268 | hypothetical protein | |
18 | sce4993 | 7016342..7017259 [-], 918 | 162453269 | hypothetical protein | |
19 | sce4994 | 7017795..7018307 [+], 513 | 162453270 | hypothetical protein | TssD |
20 | sce4995 | 7018446..7018931 [+], 486 | 162453271 | hypothetical protein | TssD |
21 | sce4996 | 7018978..7019397 [+], 420 | 162453272 | hypothetical protein | TssE |
22 | sce4997 | 7019471..7021240 [+], 1770 | 162453273 | hypothetical protein | TssF |
23 | sce4998 | 7021204..7022337 [+], 1134 | 162453274 | hypothetical protein | TssG |
24 | sce4999 | 7022410..7023102 [-], 693 | 162453275 | hypothetical protein | |
25 | sce5000 | 7023428..7023973 [+], 546 | 162453276 | hypothetical protein | |
26 | sce5001 | 7024077..7025138 [+], 1062 | 162453277 | hypothetical protein | |
27 | sce5002 | 7025152..7026306 [-], 1155 | 162453278 | FHA domain-containing protein | Fha |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein