 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PputGB1_2757 | 3091606..3092325 [-], 720 | 167033756 | hypothetical protein | |
2 | PputGB1_2758 | 3092337..3093557 [-], 1221 | 167033757 | PAAR repeat-containing protein | PAAR |
3 | PputGB1_2759 | 3093554..3094147 [-], 594 | 167033758 | hypothetical protein | |
4 | PputGB1_2760 | 3094169..3096010 [-], 1842 | 167033759 | ImpA family type VI secretion-associated protein | TssI |
5 | PputGB1_2761 | 3096203..3097318 [-], 1116 | 167033760 | ADP-ribosylation/crystallin J1 | |
6 | PputGB1_2762 | 3097315..3098802 [-], 1488 | 167033761 | hypothetical protein | |
7 | PputGB1_2763 | 3099710..3100459 [+], 750 | 167033762 | hypothetical protein | |
8 | PputGB1_2764 | 3100524..3101063 [+], 540 | 167033763 | type VI secretion protein | TssB |
9 | PputGB1_2765 | 3101078..3102580 [+], 1503 | 167033764 | EvpB family type VI secretion protein | TssC |
10 | PputGB1_2766 | 3102607..3103089 [+], 483 | 167033765 | type VI secretion system lysozyme-like protein | TssE |
11 | PputGB1_2767 | 3103089..3104909 [+], 1821 | 167033766 | type VI secretion protein | TssF |
12 | PputGB1_2768 | 3104873..3105943 [+], 1071 | 167033767 | type VI secretion protein | TssG |
13 | PputGB1_2769 | 3105940..3108537 [+], 2598 | 167033768 | type VI secretion ATPase | TssH |
14 | PputGB1_2770 | 3108562..3109284 [+], 723 | 167033769 | hypothetical protein | TssJ |
15 | PputGB1_2771 | 3109281..3110624 [+], 1344 | 167033770 | type VI secretion protein | TssK |
16 | PputGB1_2772 | 3110621..3111337 [+], 717 | 167033771 | hypothetical protein | TssL |
17 | PputGB1_2773 | 3111368..3115165 [+], 3798 | 167033772 | type VI secretion protein IcmF | TssM |
18 | PputGB1_2774 | 3115162..3116070 [+], 909 | 167033773 | hypothetical protein | |
19 | PputGB1_2775 | 3116067..3118562 [+], 2496 | 167033774 | OmpA/MotB domain-containing protein | TssM |
20 | PputGB1_2776 | 3118706..3119224 [+], 519 | 167033775 | Hcp1 family type VI secretion system effector | TssD |
21 | PputGB1_2777 | 3119309..3120406 [+], 1098 | 167033776 | ImpA family type VI secretion-associated protein | TssA |
22 | PputGB1_2778 | 3120521..3123037 [+], 2517 | 167033777 | excinuclease ABC subunit A | |
23 | PputGB1_2779 | 3123125..3123631 [+], 507 | 167033778 | ECF subfamily RNA polymerase sigma-24 factor | |
24 | PputGB1_2780 | 3123631..3124593 [+], 963 | 167033779 | anti-FecI sigma factor FecR | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein