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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YPK_1464 | 1616059..1617153 [+], 1095 | 170023705 | murein hydrolase B | |
2 | YPK_1465 | 1618395..1618997 [+], 603 | 170023706 | LuxR family transcriptional regulator | |
3 | YPK_1466 | 1619370..1619852 [-], 483 | 170023707 | hypothetical protein | |
4 | YPK_1467 | 1619849..1621531 [-], 1683 | 170023708 | OmpA/MotB domain-containing protein | TagL |
5 | YPK_1468 | 1621532..1622233 [-], 702 | 170023709 | hypothetical protein | |
6 | YPK_1469 | 1622230..1623567 [-], 1338 | 170023710 | hypothetical protein | |
7 | YPK_1470 | 1623607..1624638 [-], 1032 | 170023711 | hypothetical protein | |
8 | YPK_1471 | 1624645..1625838 [-], 1194 | 170023712 | ImpA domain-containing protein | TssA |
9 | YPK_1472 | 1625937..1626962 [-], 1026 | 170023713 | type VI secretion protein | TssG |
10 | YPK_1473 | 1626962..1628842 [-], 1881 | 170023714 | type VI secretion protein | TssF |
11 | YPK_1474 | 1629626..1632283 [+], 2658 | 170023715 | type VI secretion ATPase | TssH |
12 | YPK_1475 | 1632494..1633039 [+], 546 | 170023716 | fimbrial protein | |
13 | YPK_1476 | 1633196..1633957 [+], 762 | 170023717 | pili assembly chaperone | |
14 | YPK_1477 | 1634085..1636757 [+], 2673 | 170023718 | fimbrial biogenesis outer membrane usher protein | |
15 | YPK_1478 | 1636742..1637350 [+], 609 | 170023719 | fimbrial protein | |
16 | YPK_1479 | 1637456..1637980 [+], 525 | 170023720 | type VI secretion protein | TssB |
17 | YPK_1480 | 1638004..1639506 [+], 1503 | 170023721 | EvpB family type VI secretion protein | TssC |
18 | YPK_1481 | 1639755..1640324 [+], 570 | 170023722 | Hcp1 family type VI secretion system effector | TssD |
19 | YPK_1482 | 1640577..1641137 [+], 561 | 170023723 | hypothetical protein | TssJ |
20 | YPK_1483 | 1641141..1642490 [+], 1350 | 170023724 | type VI secretion protein | TssK |
21 | YPK_1484 | 1642487..1643863 [+], 1377 | 170023725 | type VI secretion system OmpA/MotB family protein | TssL |
22 | YPK_1485 | 1643872..1647699 [+], 3828 | 170023726 | type VI secretion protein IcmF | TssM |
23 | YPK_1486 | 1648026..1650794 [+], 2769 | 170023727 | ImpA family type VI secretion-associated protein | TssI |
24 | YPK_1487 | 1650893..1651153 [+], 261 | 170023728 | hypothetical protein | PAAR |
25 | YPK_1488 | 1651153..1652001 [+], 849 | 170023729 | hypothetical protein | |
26 | YPK_1489 | 1652021..1652827 [+], 807 | 170023730 | virulence protein SciE type | TagJ |
27 | YPK_1490 | 1652892..1653371 [+], 480 | 170023731 | type VI secretion system lysozyme-like protein | TssE |
28 | YPK_1491 | 1653396..1653743 [+], 348 | 170023732 | hypothetical protein | |
29 | YPK_1492 | 1653818..1654159 [-], 342 | 170023733 | alkylphosphonate utilization operon protein PhnA | |
30 | YPK_1493 | 1654535..1656574 [-], 2040 | 170023734 | hypothetical protein | |
31 | YPK_1494 | 1656579..1657121 [-], 543 | 170023735 | LemA family protein | |
32 | YPK_1495 | 1657738..1658205 [+], 468 | 170023736 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein