 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BamMC406_0378 | 426299..426823 [+], 525 | 172059443 | hypothetical protein | |
2 | BamMC406_0381 | 428962..429165 [+], 204 | 172059444 | hypothetical protein | |
3 | BamMC406_0382 | 429248..430048 [-], 801 | 172059445 | extracellular solute-binding protein | |
4 | BamMC406_0383 | 430361..433534 [+], 3174 | 172059446 | ImpA family type VI secretion-associated protein | TssI |
5 | BamMC406_0384 | 433585..438237 [+], 4653 | 172059447 | YD repeat-containing protein | |
6 | BamMC406_0385 | 438245..438649 [+], 405 | 172059448 | hypothetical protein | |
7 | BamMC406_0388 | 440771..440941 [+], 171 | 172059449 | hypothetical protein | |
8 | BamMC406_0389 | 441179..441742 [+], 564 | 172059450 | hypothetical protein | |
9 | BamMC406_0390 | 442312..442695 [+], 384 | 172059451 | hypothetical protein | |
10 | BamMC406_0391 | 443031..443510 [+], 480 | 172059452 | hypothetical protein | |
11 | BamMC406_0392 | 443691..444116 [+], 426 | 172059453 | hypothetical protein | |
12 | BamMC406_0393 | 444237..444488 [+], 252 | 172059454 | hypothetical protein | |
13 | BamMC406_0394 | 444482..444817 [+], 336 | 172059455 | hypothetical protein | |
14 | BamMC406_0395 | 445210..445518 [+], 309 | 172059456 | hypothetical protein | |
15 | BamMC406_0396 | 445535..445789 [+], 255 | 172059457 | hypothetical protein | |
16 | BamMC406_0397 | 446095..446460 [+], 366 | 172059458 | hypothetical protein | |
17 | BamMC406_0398 | 446554..447336 [-], 783 | 172059459 | hypothetical protein | TssL |
18 | BamMC406_0399 | 447333..448679 [-], 1347 | 172059460 | type VI secretion protein | TssK |
19 | BamMC406_0400 | 448784..449392 [-], 609 | 172059461 | hypothetical protein | TssJ |
20 | BamMC406_0401 | 449769..450407 [+], 639 | 172059462 | hypothetical protein | |
21 | BamMC406_0402 | 450452..450967 [+], 516 | 172059463 | type VI secretion protein | TssB |
22 | BamMC406_0403 | 450983..452473 [+], 1491 | 172059464 | EvpB family type VI secretion protein | TssC |
23 | BamMC406_0404 | 452544..453047 [+], 504 | 172059465 | Hcp1 family type VI secretion system effector | TssD |
24 | BamMC406_0405 | 453110..453595 [+], 486 | 172059466 | type VI secretion system lysozyme-like protein | TssE |
25 | BamMC406_0406 | 453673..455508 [+], 1836 | 172059467 | type VI secretion protein | TssF |
26 | BamMC406_0407 | 455472..456572 [+], 1101 | 172059468 | type VI secretion protein | TssG |
27 | BamMC406_0408 | 456616..459285 [+], 2670 | 172059469 | type VI secretion ATPase | TssH |
28 | BamMC406_0409 | 459325..460446 [+], 1122 | 172059470 | ImpA family type VI secretion-associated protein | TssA |
29 | BamMC406_0410 | 460526..463087 [+], 2562 | 172059471 | ImpA family type VI secretion-associated protein | TssI |
30 | BamMC406_0411 | 463087..464109 [+], 1023 | 172059472 | hypothetical protein | |
31 | BamMC406_0412 | 464096..464254 [+], 159 | 172059473 | hypothetical protein | |
32 | BamMC406_0413 | 464247..464402 [+], 156 | 172059474 | hypothetical protein | |
33 | BamMC406_0414 | 464414..465265 [+], 852 | 172059475 | hypothetical protein | |
34 | BamMC406_0415 | 465258..467552 [+], 2295 | 172059476 | hypothetical protein | |
35 | BamMC406_0416 | 467739..468674 [-], 936 | 172059477 | hypothetical protein | |
36 | BamMC406_0417 | 468873..469571 [-], 699 | 172059478 | hypothetical protein | |
37 | BamMC406_0418 | 469588..470538 [-], 951 | 172059479 | OmpA/MotB domain-containing protein | TagL |
38 | BamMC406_0419 | 470543..471532 [-], 990 | 172059480 | hypothetical protein | |
39 | BamMC406_0420 | 471529..475470 [-], 3942 | 172059481 | type VI secretion protein IcmF | TssM |
40 | BamMC406_0421 | 475772..476617 [-], 846 | 172059482 | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin | |
41 | BamMC406_0422 | 476739..477701 [+], 963 | 172059483 | hypothetical protein | |
42 | BamMC406_0423 | 477869..478942 [+], 1074 | 172059484 | Mg2 transporter protein CorA family protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein