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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BamMC406_3003 | 3324578..3325984 [-], 1407 | 172062043 | integral membrane sensor signal transduction histidine kinase | |
2 | BamMC406_3004 | 3326042..3326680 [+], 639 | 172062044 | hypothetical protein | |
3 | BamMC406_3005 | 3326638..3327537 [+], 900 | 172062045 | acetylglutamate kinase | |
4 | BamMC406_3006 | 3327534..3328325 [+], 792 | 172062046 | pyrimidine 5'-nucleotidase | |
5 | BamMC406_3007 (slmA) | 3328292..3328957 [+], 666 | 172062047 | nucleoid occlusion protein | |
6 | BamMC406_3008 | 3329037..3331700 [-], 2664 | 172062048 | type VI secretion ATPase | TssH |
7 | BamMC406_3009 | 3332219..3333238 [+], 1020 | 172062049 | hypothetical protein | |
8 | BamMC406_3010 | 3333225..3334079 [+], 855 | 172062050 | virulence protein SciE type | TagJ |
9 | BamMC406_3011 | 3334063..3334584 [+], 522 | 172062051 | type VI secretion system lysozyme-like protein | TssE |
10 | BamMC406_3012 | 3334586..3336466 [+], 1881 | 172062052 | type VI secretion protein | TssF |
11 | BamMC406_3013 | 3336470..3337531 [+], 1062 | 172062053 | type VI secretion protein | TssG |
12 | BamMC406_3014 | 3337528..3338586 [+], 1059 | 172062054 | ImpA domain-containing protein | TssA |
13 | BamMC406_3015 | 3338628..3339659 [+], 1032 | 172062055 | fimbrial protein | |
14 | BamMC406_3016 | 3339699..3341054 [+], 1356 | 172062056 | hypothetical protein | |
15 | BamMC406_3017 | 3341168..3344617 [-], 3450 | 172062057 | YD repeat-containing protein | |
16 | BamMC406_3018 | 3344638..3344904 [-], 267 | 172062058 | PAAR repeat-containing protein | PAAR |
17 | BamMC406_3019 | 3344989..3348135 [-], 3147 | 172062059 | ImpA family type VI secretion-associated protein | TssI |
18 | BamMC406_3020 | 3348242..3348736 [-], 495 | 172062060 | hypothetical protein | |
19 | BamMC406_3021 | 3348786..3349571 [-], 786 | 172062061 | putative cytoplasmic protein | |
20 | BamMC406_3022 | 3349580..3353488 [-], 3909 | 172062062 | type VI secretion protein IcmF | TssM |
21 | BamMC406_3023 | 3353503..3354807 [-], 1305 | 172062063 | hypothetical protein | TssL |
22 | BamMC406_3024 | 3354804..3356153 [-], 1350 | 172062064 | type VI secretion protein | TssK |
23 | BamMC406_3025 | 3356155..3356697 [-], 543 | 172062065 | putative lipoprotein | TssJ |
24 | BamMC406_3026 | 3356832..3357314 [-], 483 | 172062066 | hypothetical protein | TssD |
25 | BamMC406_3027 | 3357516..3359015 [-], 1500 | 172062067 | EvpB family type VI secretion protein | TssC |
26 | BamMC406_3028 | 3359063..3359599 [-], 537 | 172062068 | type VI secretion protein | TssB |
27 | BamMC406_3029 | 3359955..3361622 [-], 1668 | 172062069 | OmpA/MotB domain-containing protein | TagL |
28 | BamMC406_3030 | 3361619..3362323 [-], 705 | 172062070 | hypothetical protein | TssL |
29 | BamMC406_3031 | 3362358..3362921 [-], 564 | 172062071 | fimbrial protein | |
30 | BamMC406_3032 | 3362962..3365754 [-], 2793 | 172062072 | fimbrial biogenesis outer membrane usher protein | |
31 | BamMC406_3033 | 3365791..3366522 [-], 732 | 172062073 | Pili assembly chaperone, N-terminal | |
32 | BamMC406_3034 | 3366612..3367154 [-], 543 | 172062074 | fimbrial protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein