 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | XAC4106 | 4809007..4811409 [+], 2403 | 21244823 | dipeptidyl peptidase | |
2 | XAC4107 | 4811802..4812518 [+], 717 | 77748757 | hypothetical protein | |
3 | XAC4108 | 4812515..4813084 [+], 570 | 21244825 | hypothetical protein | |
4 | XAC4109 (hemF) | 4813368..4814267 [+], 900 | 21244826 | coproporphyrinogen III oxidase | |
5 | XAC4110 (polA) | 4815123..4817927 [-], 2805 | 21244827 | DNA polymerase I | |
6 | XAC4111 | 4818004..4818414 [+], 411 | 21244828 | hypothetical protein | |
7 | XAC4112 | 4818638..4819681 [-], 1044 | 21244829 | hypothetical protein | TssA |
8 | XAC4113 (yapH) | 4819731..4826966 [-], 7236 | 21244830 | YapH protein | |
9 | XAC4114 (shlB) | 4826870..4828552 [-], 1683 | 21244831 | hemolysin activator protein | |
10 | XAC4115 | 4828543..4829004 [-], 462 | 21244832 | hypothetical protein | |
11 | XAC4116 | 4829001..4832708 [-], 3708 | 21244833 | serine/threonine kinase | |
12 | XAC4117 (ptc1) | 4832713..4833429 [-], 717 | 21244834 | phosphoprotein phosphatase | |
13 | XAC4118 | 4833465..4833995 [-], 531 | 21244835 | hypothetical protein | |
14 | XAC4119 | 4833998..4837528 [-], 3531 | 21244836 | hypothetical protein | TssM |
15 | XAC4120 | 4837525..4838880 [-], 1356 | 21244837 | hypothetical protein | TssL |
16 | XAC4121 | 4838787..4840121 [-], 1335 | 21244838 | hypothetical protein | TssK |
17 | XAC4122 | 4840701..4842017 [-], 1317 | 21244839 | hypothetical protein | Fha |
18 | XAC4123 | 4842304..4842852 [-], 549 | 21244840 | hypothetical protein | |
19 | XAC4124 | 4842849..4844885 [-], 2037 | 21244841 | hypothetical protein | TssI |
20 | XAC4125 | 4844967..4846298 [-], 1332 | 21244842 | hypothetical protein | |
21 | XAC4126 | 4846534..4846929 [-], 396 | 21244843 | hypothetical protein | PAAR |
22 | XAC4127 (pknB) | 4846892..4849189 [-], 2298 | 21244844 | serine/threonine kinase | |
23 | XAC4128 (ecfR) | 4849390..4849929 [-], 540 | 21244845 | extracytoplasmic sigma factor | |
24 | XAC4129 (rpoE) | 4850278..4850805 [+], 528 | 21244846 | ECF sigma factor | |
25 | XAC4130 | 4850802..4851872 [+], 1071 | 21244847 | transmembrane sensor | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein