 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BamMC406_3639 | 583804..585837 [+], 2034 | 172062671 | NADH:flavin oxidoreductase/NADH oxidase | |
2 | BamMC406_3640 | 586017..586421 [-], 405 | 172062672 | hypothetical protein | |
3 | BamMC406_3641 | 586574..587467 [-], 894 | 172062673 | LysR family transcriptional regulator | |
4 | BamMC406_3642 | 587554..588339 [+], 786 | 172062674 | ribosyldihydronicotinamide dehydrogenase (quinone) | |
5 | BamMC406_3643 | 588351..588773 [-], 423 | 172062675 | type VI secretion system lysozyme-like protein | TssE |
6 | BamMC406_3644 | 588770..591478 [-], 2709 | 172062676 | type VI secretion ATPase | TssH |
7 | BamMC406_3645 | 591574..592059 [-], 486 | 172062677 | Hcp1 family type VI secretion system effector | TssD |
8 | BamMC406_3646 | 592154..593917 [-], 1764 | 172062678 | OmpA/MotB domain-containing protein | TagL |
9 | BamMC406_3647 | 593929..594603 [-], 675 | 172062679 | hypothetical protein | TssL |
10 | BamMC406_3648 | 594684..596033 [-], 1350 | 172062680 | type VI secretion protein | TssK |
11 | BamMC406_3649 | 596614..597126 [+], 513 | 172062681 | type VI secretion protein | TssB |
12 | BamMC406_3650 | 597200..598750 [+], 1551 | 172062682 | EvpB family type VI secretion protein | TssC |
13 | BamMC406_3651 | 598829..601168 [+], 2340 | 172062683 | Rhs element Vgr protein | TssI |
14 | BamMC406_3652 | 601178..603805 [+], 2628 | 172062684 | chitinase-like protein | |
15 | BamMC406_3653 | 603807..604364 [+], 558 | 172062685 | hypothetical protein | |
16 | BamMC406_3654 | 605906..607141 [+], 1236 | 172062686 | hypothetical protein | |
17 | BamMC406_3655 | 607138..610956 [+], 3819 | 172062687 | hypothetical protein | TssM |
18 | BamMC406_3656 | 610965..612548 [+], 1584 | 172062688 | type VI secretion-associated protein | TssA |
19 | BamMC406_3657 | 612558..614372 [+], 1815 | 172062689 | type VI secretion protein | TssF |
20 | BamMC406_3658 | 614369..615493 [+], 1125 | 172062690 | type VI secretion protein | TssG |
21 | BamMC406_3659 | 615507..616025 [+], 519 | 172062691 | hypothetical protein | TssJ |
22 | BamMC406_3660 | 616090..616380 [-], 291 | 172062692 | muconolactone delta-isomerase | |
23 | BamMC406_3661 | 616424..617326 [-], 903 | 172062693 | catechol 1,2-dioxygenase | |
24 | BamMC406_3662 | 617363..618496 [-], 1134 | 172062694 | muconate and chloromuconate cycloisomerase | |
25 | BamMC406_3663 | 618588..619478 [+], 891 | 172062695 | LysR family transcriptional regulator | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein