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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YPTS_0660 (djlA) | 736894..737727 [+], 834 | 186893989 | Dna-J like membrane chaperone protein | |
2 | YPTS_0661 | 738044..738664 [-], 621 | 186893990 | pseudouridine synthase | |
3 | YPTS_0662 | 739887..740630 [-], 744 | 186893991 | hypothetical protein | |
4 | YPTS_0663 | 740987..741973 [+], 987 | 186893992 | ImpA domain-containing protein | TssA |
5 | YPTS_0664 | 741984..742544 [+], 561 | 186893993 | type VI secretion protein | TssB |
6 | YPTS_0665 | 742544..744055 [+], 1512 | 186893994 | EvpB family type VI secretion protein | TssC |
7 | YPTS_0666 | 744218..744736 [+], 519 | 186893995 | hypothetical protein | TssD |
8 | YPTS_0667 | 744810..745253 [+], 444 | 186893996 | type VI secretion system lysozyme-like protein | TssE |
9 | YPTS_0668 | 745286..747130 [+], 1845 | 186893997 | type VI secretion protein | TssF |
10 | YPTS_0669 | 747123..748106 [+], 984 | 186893998 | type VI secretion protein | TssG |
11 | YPTS_0670 | 748124..750712 [+], 2589 | 186893999 | type VI secretion ATPase | TssH |
12 | YPTS_0671 | 750816..753164 [+], 2349 | 186894000 | ImpA family type VI secretion-associated protein | TssI |
13 | YPTS_0672 | 753177..755396 [+], 2220 | 186894001 | pentapeptide repeat-containing protein | |
14 | YPTS_0673 | 755422..756525 [+], 1104 | 186894002 | pentapeptide repeat-containing protein | |
15 | YPTS_0674 | 756518..757135 [+], 618 | 186894003 | hypothetical protein | |
16 | YPTS_0675 | 757141..757506 [+], 366 | 186894004 | hypothetical protein | PAAR |
17 | YPTS_0676 | 757499..757990 [+], 492 | 186894005 | putative lipoprotein | TssJ |
18 | YPTS_0677 | 758110..759465 [+], 1356 | 186894006 | type VI secretion protein | TssK |
19 | YPTS_0678 | 759462..761072 [+], 1611 | 186894007 | hypothetical protein | TssL |
20 | YPTS_0679 | 761081..764575 [+], 3495 | 186894008 | type VI secretion protein IcmF | TssM |
21 | YPTS_0680 | 764597..764950 [+], 354 | 186894009 | hypothetical protein | |
22 | YPTS_0681 | 765098..765244 [+], 147 | 186894010 | hypothetical protein | |
23 | YPTS_0682 | 765206..768112 [-], 2907 | 186894011 | ATP-dependent helicase HepA | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein