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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BAV0256 (proB) | 263485..264618 [-], 1134 | 187476770 | gamma-glutamyl kinase | |
2 | BAV0257 (obgE) | 264697..265815 [-], 1119 | 187476771 | GTPase ObgE | |
3 | BAV0258 (rpmA) | 265998..266258 [-], 261 | 187476772 | 50S ribosomal protein L27 | |
4 | BAV0259 (rplU) | 266291..266602 [-], 312 | 187476773 | 50S ribosomal protein L21 | |
5 | BAV0260 (cel) | 266947..267912 [+], 966 | 187476774 | octaprenyl-diphosphate synthase | |
6 | BAV0261 | 268341..268616 [-], 276 | 187476775 | hypothetical protein | |
7 | BAV0262 | 268628..270964 [-], 2337 | 187476776 | bifunctional protein include phospholipase and oxidoreductase | |
8 | BAV0263 (bdhA) | 271008..271793 [-], 786 | 187476777 | 3-hydroxybutyrate dehydrogenase | |
9 | BAV0264 (adc) | 271841..272581 [-], 741 | 187476778 | acetoacetate decarboxylase | |
10 | BAV0265 | 273187..273738 [+], 552 | 187476779 | hypothetical protein | TssB |
11 | BAV0266 | 273790..275283 [+], 1494 | 187476780 | hypothetical protein | TssC |
12 | BAV0267 | 275344..275820 [+], 477 | 187476781 | hypothetical protein | TssD |
13 | BAV0268 | 275829..276233 [+], 405 | 187476782 | hypothetical protein | TssE |
14 | BAV0269 | 276250..277992 [+], 1743 | 187476783 | hypothetical protein | TssF |
15 | BAV0270 | 277989..278903 [+], 915 | 187476784 | hypothetical protein | TssG |
16 | BAV0271 | 278906..281524 [+], 2619 | 187476785 | ATPase with chaperone activity | TssH |
17 | BAV0272 | 281517..283367 [+], 1851 | 187476786 | hypothetical protein | TssI |
18 | BAV0273 | 283367..283996 [+], 630 | 187476787 | hypothetical protein | |
19 | BAV0274 | 283993..284379 [+], 387 | 187476788 | hypothetical protein | |
20 | BAV0275 | 284383..284535 [+], 153 | 187476789 | membrane protein | |
21 | BAV0276 | 284535..285467 [+], 933 | 187476790 | extracellular solute-binding protein | |
22 | BAV0277 | 285511..286755 [+], 1245 | 187476791 | transport protein | |
23 | BAV0278 | 286850..288160 [+], 1311 | 187476792 | transport protein | |
24 | BAV0279 | 288157..288609 [+], 453 | 187476793 | lipoprotein | |
25 | BAV0280 | 288651..289940 [+], 1290 | 187476794 | hypothetical protein | TssK |
26 | BAV0281 | 289937..290680 [+], 744 | 187476795 | hypothetical protein | TssL |
27 | BAV0282 | 290714..294478 [+], 3765 | 187476796 | hypothetical protein | TssM |
28 | BAV0283 | 294475..295488 [+], 1014 | 187476797 | hypothetical protein | TssA |
29 | BAV0284 | 295613..296482 [+], 870 | 187476798 | hypothetical protein | |
30 | BAV0285 | 296612..298021 [-], 1410 | 187476799 | amidase | |
31 | BAV0286 | 298069..299295 [-], 1227 | 187476800 | branched-chain amino acid binding protein | |
32 | BAV0287 | 299415..300341 [+], 927 | 187476801 | LysR family transcriptional regulator | |
33 | BAV0288 | 300438..301427 [+], 990 | 187476802 | branched-chain amino acid transport permease | |
34 | BAV0289 | 301438..302319 [+], 882 | 187476803 | branched-chain amino acid transport permease | |
35 | BAV0290 | 302333..303040 [+], 708 | 187476804 | branched-chain amino acid ABC transporter ATP-binding protein | |
36 | BAV0291 | 303042..303782 [+], 741 | 187476805 | branched-chain amino acid ABC transporter ATP-binding protein | |
37 | BAV0292 | 303898..304734 [-], 837 | 187476806 | metallo-phosphoesterase | |
38 | BAV0293 | 304769..305713 [-], 945 | 187476807 | membrane protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein