 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Bphyt_4905 | 1029756..1030007 [+], 252 | 187919608 | hypothetical protein | |
2 | Bphyt_4906 | 1030272..1031378 [+], 1107 | 187919609 | TrkA-N domain-containing protein | |
3 | Bphyt_4907 | 1031424..1032359 [+], 936 | 187919610 | ornithine cyclodeaminase/mu-crystallin | |
4 | Bphyt_4908 | 1032663..1034144 [+], 1482 | 187919611 | glucose-6-phosphate 1-dehydrogenase | |
5 | Bphyt_4909 | 1034218..1035000 [-], 783 | 187919612 | type IV / VI secretion system protein, DotU family | TssL |
6 | Bphyt_4910 | 1034997..1036343 [-], 1347 | 187919613 | type VI secretion protein | TssK |
7 | Bphyt_4911 | 1036452..1037084 [-], 633 | 187919614 | type VI secretion protein | TssJ |
8 | Bphyt_4912 | 1037439..1038122 [+], 684 | 187919615 | tetratricopeptide repeat-containing protein | |
9 | Bphyt_4913 | 1038159..1038707 [+], 549 | 187919616 | type VI secretion protein | TssB |
10 | Bphyt_4914 | 1038722..1040212 [+], 1491 | 187919617 | EvpB family type VI secretion protein | TssC |
11 | Bphyt_4915 | 1040290..1040793 [+], 504 | 187919618 | type VI secretion system effector, Hcp1 family | TssD |
12 | Bphyt_4916 | 1040879..1041358 [+], 480 | 187919619 | type VI secretion system lysozyme-like protein | TssE |
13 | Bphyt_4917 | 1041478..1043316 [+], 1839 | 187919620 | type VI secretion protein | TssF |
14 | Bphyt_4918 | 1043280..1044374 [+], 1095 | 187919621 | type VI secretion protein | TssG |
15 | Bphyt_4919 | 1044410..1047085 [+], 2676 | 187919622 | type VI secretion ATPase, ClpV1 family | TssH |
16 | Bphyt_4920 | 1047140..1048249 [+], 1110 | 187919623 | type VI secretion-associated protein, ImpA family | TssA |
17 | Bphyt_4921 | 1048325..1049287 [-], 963 | 187919624 | OmpA/MotB domain-containing protein | TagL |
18 | Bphyt_4922 | 1049292..1050284 [-], 993 | 187919625 | type VI secretion-associated protein | |
19 | Bphyt_4923 | 1050281..1054147 [-], 3867 | 187919626 | type VI secretion protein IcmF | TssM |
20 | Bphyt_4924 | 1054407..1055048 [-], 642 | 187919627 | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin | |
21 | Bphyt_4925 | 1055377..1056312 [+], 936 | 187919628 | hypothetical protein | |
22 | Bphyt_4926 | 1056523..1057665 [+], 1143 | 187919629 | inosine/uridine-preferring nucleoside hydrolase | |
23 | Bphyt_4927 | 1057707..1058663 [-], 957 | 187919630 | LysR family transcriptional regulator | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein