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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Bphyt_0929 | 1043465..1043770 [-], 306 | 187922930 | urease subunit beta | |
2 | Bphyt_0930 (ureA) | 1043786..1044088 [-], 303 | 187922931 | urease subunit gamma | |
3 | Bphyt_0931 | 1044264..1045067 [-], 804 | 187922932 | family 3 extracellular solute-binding protein | |
4 | Bphyt_0932 | 1045319..1046404 [-], 1086 | 187922933 | hypothetical protein | |
5 | Bphyt_0933 | 1046459..1048156 [-], 1698 | 187922934 | hypothetical protein | |
6 | Bphyt_0934 | 1048323..1052312 [-], 3990 | 187922935 | type VI secretion protein IcmF | TssM |
7 | Bphyt_0935 | 1052341..1053585 [-], 1245 | 187922936 | hypothetical protein | TssL |
8 | Bphyt_0936 | 1053731..1055074 [-], 1344 | 187922937 | type VI secretion protein | TssK |
9 | Bphyt_0937 | 1055087..1055599 [-], 513 | 187922938 | type VI secretion lipoprotein | TssJ |
10 | Bphyt_0938 | 1055671..1056153 [-], 483 | 187922939 | hypothetical protein | TssD |
11 | Bphyt_0939 | 1056373..1056804 [-], 432 | 187922940 | hypothetical protein | |
12 | Bphyt_0940 | 1056906..1058405 [-], 1500 | 187922941 | type VI secretion protein EvpB | TssC |
13 | Bphyt_0941 | 1058476..1059021 [-], 546 | 187922942 | type VI secretion protein | TssB |
14 | Bphyt_0942 | 1059058..1061778 [-], 2721 | 187922943 | type VI secretion ATPase, ClpV1 family | TssH |
15 | Bphyt_0943 | 1062472..1063080 [+], 609 | 187922944 | hypothetical protein | |
16 | Bphyt_0944 | 1063077..1063949 [+], 873 | 187922945 | virulence protein SciE type | TagJ |
17 | Bphyt_0945 | 1063946..1064482 [+], 537 | 187922946 | type VI secretion system lysozyme-like protein | TssE |
18 | Bphyt_0946 | 1064498..1066387 [+], 1890 | 187922947 | type VI secretion protein | TssF |
19 | Bphyt_0947 | 1066387..1067499 [+], 1113 | 187922948 | type VI secretion protein | TssG |
20 | Bphyt_0948 | 1067492..1068598 [+], 1107 | 187922949 | ImpA domain-containing protein | TssA |
21 | Bphyt_0949 | 1068876..1069757 [-], 882 | 187922950 | urease accessory protein UreD | |
22 | Bphyt_0950 | 1069875..1070567 [-], 693 | 187922951 | urea ABC transporter ATP-binding protein | |
23 | Bphyt_0951 | 1070600..1071466 [-], 867 | 187922952 | urea ABC transporter ATP-binding protein | |
24 | Bphyt_0952 | 1071463..1072647 [-], 1185 | 187922953 | urea ABC transporter permease | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein