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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PXO_00273 | 1582371..1582553 [-], 183 | 188575801 | hypothetical protein | |
2 | PXO_00272 | 1583130..1585964 [-], 2835 | 188575802 | hypothetical protein | |
3 | PXO_00271 | 1585961..1586890 [-], 930 | 188575803 | hypothetical protein | |
4 | PXO_00270 | 1586899..1589661 [-], 2763 | 188575804 | Rhs element Vgr protein | TssI |
5 | PXO_00269 | 1589955..1590419 [+], 465 | 188575805 | isrso17-ISXo8 transposase | |
6 | PXO_00268 | 1590400..1590993 [+], 594 | 188575806 | ISXo8 transposase | |
7 | PXO_00267 | 1591206..1592174 [-], 969 | 188575807 | ISXo1 transposase | |
8 | PXO_00266 | 1592594..1593046 [+], 453 | 188575808 | hypothetical protein | TssB |
9 | PXO_00265 (sciI) | 1593051..1594553 [+], 1503 | 188575809 | SciI protein | TssC |
10 | PXO_00264 | 1594653..1595156 [+], 504 | 188575810 | hypothetical protein | TssD |
11 | PXO_00263 (impE) | 1595192..1596025 [+], 834 | 188575811 | ImpE protein | TagJ |
12 | PXO_00262 | 1596013..1596516 [+], 504 | 188575812 | hypothetical protein | TssE |
13 | PXO_00261 (sciC) | 1596520..1598397 [+], 1878 | 188575813 | SciC protein | TssF |
14 | PXO_00260 | 1598361..1599371 [+], 1011 | 188575814 | hypothetical protein | TssG |
15 | PXO_00259 (clpB) | 1599404..1602109 [+], 2706 | 188575815 | chaperone ClpB | TssH |
16 | PXO_00258 | 1603417..1603668 [+], 252 | 188575816 | transposase | |
17 | PXO_00257 | 1603743..1604201 [+], 459 | 188575817 | hypothetical protein | |
18 | PXO_00256 | 1604466..1606403 [+], 1938 | 188575818 | Rhs-family protein | TssI |
19 | PXO_00254 | 1606412..1606951 [+], 540 | 188575819 | hypothetical protein | |
20 | PXO_00253 | 1606948..1608360 [+], 1413 | 188575820 | FHA domain-containing protein | Fha |
21 | PXO_00252 (impJ) | 1608357..1609694 [+], 1338 | 188575821 | protein ImpJ | TssK |
22 | PXO_00251 (ompA) | 1609696..1611012 [+], 1317 | 188575822 | OmpA family membrane protein | TssL |
23 | PXO_00250 (sciS) | 1611016..1614474 [+], 3459 | 188575823 | SciS protein | TssM |
24 | PXO_00249 | 1614480..1615118 [+], 639 | 188575824 | hypothetical protein | |
25 | PXO_00248 | 1615187..1615837 [+], 651 | 188575825 | phosphoprotein phosphatase | |
26 | PXO_00247 | 1615834..1618737 [+], 2904 | 188575826 | protein kinase | |
27 | PXO_00246 | 1618734..1619060 [+], 327 | 188575827 | hypothetical protein | |
28 | PXO_00245 | 1619233..1620261 [-], 1029 | 188575828 | ImpA-related N-terminal family | TssA |
29 | PXO_00244 (lysR) | 1620270..1621217 [-], 948 | 188575829 | LysR family transcriptional regulator | |
30 | PXO_00243 | 1621364..1623796 [-], 2433 | 188575830 | two-component VirA-like sensor kinase | |
31 | PXO_00242 | 1623820..1624812 [-], 993 | 188575831 | cytochrome C peroxidase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein