I. Summary

SecReT6 ID	288
Strain	Burkholderia multivorans ATCC 17616
Replicon	chromosome I [Browse all T6SS(s) in this replicon]
Accession	NC_010804
Location	314346..346077
Comment
Function	N/A
T6SS Type	Type i; subtype i4b
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	1	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	0

III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	BMULJ_00298	312322..313581 [-], 1260	189349181	ISBmu12d transposase
2	BMULJ_00299	313951..314259 [+], 309	189349182	hypothetical protein
3	BMULJ_00300	314346..315128 [-], 783	189349183	hypothetical protein	TssL
4	BMULJ_00301	315125..316471 [-], 1347	189349184	hypothetical protein	TssK
5	BMULJ_00302	316574..317185 [-], 612	189349185	putative lipoprotein	TssJ
6	BMULJ_00303	317561..318193 [+], 633	189349186	putative lipoprotein
7	BMULJ_00304	318229..318744 [+], 516	189349187	hypothetical protein	TssB
8	BMULJ_00305	318760..320250 [+], 1491	189349188	hypothetical protein	TssC
9	BMULJ_00306	320322..320825 [+], 504	189349189	hypothetical protein	TssD
10	BMULJ_00307	320888..321373 [+], 486	189349190	hypothetical protein	TssE
11	BMULJ_00308	321452..323287 [+], 1836	189349191	hypothetical protein	TssF
12	BMULJ_00309	323251..324351 [+], 1101	189349192	hypothetical protein	TssG
13	BMULJ_00310 (clpB)	324396..327065 [+], 2670	189349193	protease associated ATPase	TssH
14	BMULJ_00311	327104..328225 [+], 1122	189349194	hypothetical protein	TssA
15	BMULJ_00312	328294..330855 [+], 2562	189349195	putative Rhs element Vgr protein	TssI
16	BMULJ_00313	330855..331895 [+], 1041	189349196	hypothetical protein
17	BMULJ_00314	332140..332991 [+], 852	189349197	hypothetical protein
18	BMULJ_00315	332984..335278 [+], 2295	189349198	hypothetical protein
19	BMULJ_00316	335275..336939 [+], 1665	189349199	hypothetical protein
20	BMULJ_00317	338215..338982 [+], 768	189349200	hypothetical protein
21	BMULJ_00318	339436..340251 [+], 816	189349201	hypothetical protein
22	BMULJ_00319	340655..341299 [+], 645	189349202	hypothetical protein
23	BMULJ_00320	341444..341800 [+], 357	189349203	hypothetical protein
24	BMULJ_00321	341869..342777 [+], 909	189349204	hypothetical protein
25	BMULJ_00322	343208..343954 [+], 747	189349205	hypothetical protein
26	BMULJ_00323	344046..344951 [+], 906	189349206	hypothetical protein
27	BMULJ_00324	345127..346077 [-], 951	189349207	OOP family OmpA-OmpF porin	TagL
28	BMULJ_00325	346082..347071 [-], 990	189349208	hypothetical protein

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

Homology Effector list

BCAL0343

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	BMULJ_00306	320322..320825 [+], 504	189349189	hypothetical protein	BCAL0343

Download FASTA format files

Proteins        Genes

N/A

N/A