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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | SeSA_A0290 (mltD) | 301930..303150 [-], 1221 | 194734347 | membrane-bound lytic murein transglycosylase D | |
2 | SeSA_A0291 (gloB) | 303369..304124 [-], 756 | 194736047 | hydroxyacylglutathione hydrolase | |
3 | SeSA_A0292 | 304159..304881 [+], 723 | 194735250 | methyltransferase | |
4 | SeSA_A0293 (rnhA) | 304878..305345 [-], 468 | 194736767 | ribonuclease H | |
5 | SeSA_A0294 (dnaQ) | 305400..306140 [+], 741 | 194736138 | DNA polymerase III subunit epsilon | |
6 | SeSA_A0296 | 306670..307713 [-], 1044 | 194736484 | ImpA-related N- family protein | TssA |
7 | SeSA_A0297 | 307730..308725 [-], 996 | 194736246 | type VI secretion protein, family protein | TssG |
8 | SeSA_A0298 (vasA) | 308722..310605 [-], 1884 | 194736842 | type VI secretion protein, family protein | TssF |
9 | SeSA_A0299 | 310621..311115 [-], 495 | 194737470 | type VI secretion system lysozyme-related protein | TssE |
10 | SeSA_A0300 | 311112..311936 [-], 825 | 194738070 | SciE protein | TagJ |
11 | SeSA_A0301 | 311923..312813 [-], 891 | 194734411 | hypothetical protein | |
12 | SeSA_A0302 | 312896..313033 [-], 138 | 194734926 | hypothetical protein | |
13 | SeSA_A0303 (clpV) | 313193..315856 [+], 2664 | 194734614 | type VI secretion ATPase, ClpV1 family protein | TssH |
14 | SeSA_A0304 | 315942..316232 [+], 291 | 194735383 | hypothetical protein | |
15 | SeSA_A0305 | 316294..316836 [+], 543 | 194734723 | type VI secretion protein, family protein | TssB |
16 | SeSA_A0306 | 316860..318368 [+], 1509 | 194736373 | type VI secretion protein, EvpB/family protein | TssC |
17 | SeSA_A0307 | 318720..319001 [+], 282 | 194735722 | cytoplasmic protein | |
18 | SeSA_A0308 | 319255..319740 [+], 486 | 194734344 | hemolysin-coregulated protein | TssD |
19 | SeSA_A0309 | 320034..320519 [+], 486 | 194735014 | cytoplasmic protein | STM0277 (e) |
20 | SeSA_A0310 | 320516..320887 [+], 372 | 194734402 | periplasmic protein | STM0278 (i) |
21 | SeSA_A0311 | 321030..321515 [+], 486 | 194734020 | hemolysin-coregulated protein | TssD |
22 | SeSA_A0312 | 321627..322118 [+], 492 | 194736056 | type VI secretion lipoprotein, family protein | TssJ |
23 | SeSA_A0313 | 322122..323465 [+], 1344 | 194735441 | type VI secretion protein, family protein | TssK |
24 | SeSA_A0314 | 323462..324766 [+], 1305 | 194736479 | hypothetical protein | TssL |
25 | SeSA_A0315 | 324771..325544 [+], 774 | 194737075 | hypothetical protein | |
26 | SeSA_A0318 (icmF) | 326189..330058 [+], 3870 | 194738351 | type VI secretion protein IcmF | TssM |
27 | SeSA_A0319 | 330058..330840 [+], 783 | 194733908 | cytoplasmic protein | |
28 | SeSA_A0320 | 330837..331676 [+], 840 | 194737231 | hypothetical protein | |
29 | SeSA_A0321 | 331666..331926 [+], 261 | 194737681 | hypothetical protein | |
30 | SeSA_A0322 | 332051..334243 [+], 2193 | 194735863 | Rhs-family protein | TssI |
31 | SeSA_A0323 | 334267..334713 [+], 447 | 194735948 | hypothetical protein | |
32 | SeSA_A0325 | 338692..338826 [+], 135 | 194737344 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein