 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | VFMJ11_1071 | 1122670..1123419 [+], 750 | 197336058 | hypothetical protein | |
2 | VFMJ11_1072 | 1123607..1125502 [+], 1896 | 197336023 | sensory box/ggdef family protein | |
3 | VFMJ11_1073 | 1125503..1126462 [-], 960 | 197335130 | serine/threonine protein kinase | |
4 | VFMJ11_1074 | 1126459..1127130 [-], 672 | 197335825 | protein phosphatase 2C | |
5 | VFMJ11_1075 (icmF_1) | 1127127..1130648 [-], 3522 | 197336290 | type VI secretion protein IcmF | TssM |
6 | VFMJ11_1076 | 1130659..1131492 [-], 834 | 197335286 | hypothetical protein | TssL |
7 | VFMJ11_1077 | 1131494..1132816 [-], 1323 | 197334802 | type VI secretion protein, family | TssK |
8 | VFMJ11_1078 | 1132828..1133319 [-], 492 | 197336156 | type VI secretion lipoprotein, family | TssJ |
9 | VFMJ11_1079 | 1133356..1134666 [-], 1311 | 197335638 | type VI secretion system FHA domain-containing protein | Fha |
10 | VFMJ11_1080 | 1134670..1134798 [-], 129 | 197335802 | lipoprotein | |
11 | VFMJ11_1081 | 1134801..1136369 [-], 1569 | 197335055 | transcriptional regulator | |
12 | VFMJ11_1082 (clpV_1) | 1136375..1138957 [-], 2583 | 197334334 | type VI secretion ATPase, ClpV1 family | TssH |
13 | VFMJ11_1083 | 1138954..1139994 [-], 1041 | 197336298 | type VI secretion protein, family | TssG |
14 | VFMJ11_1084 (vasA_1) | 1139958..1141709 [-], 1752 | 197334721 | type VI secretion protein, family | TssF |
15 | VFMJ11_1085 | 1141706..1142131 [-], 426 | 197336369 | type VI secretion system lysozyme-like protein | TssE |
16 | VFMJ11_1086 | 1142221..1143696 [-], 1476 | 197335473 | type VI secretion protein, EvpB/family | TssC |
17 | VFMJ11_1087 | 1143700..1144200 [-], 501 | 197334873 | type VI secretion protein, family | TssB |
18 | VFMJ11_1088 | 1144216..1145766 [-], 1551 | 197335960 | type VI secretion-associated protein, family | TssA |
19 | VFMJ11_1089 | 1145989..1146195 [-], 207 | 197335198 | hypothetical protein | |
20 | VFMJ11_1090 | 1146188..1146739 [-], 552 | 197335016 | primosomal replication protein N' | |
21 | VFMJ11_1091 | 1146750..1147520 [-], 771 | 197334287 | hypothetical protein | |
22 | VFMJ11_1092 (dinG) | 1147589..1149673 [-], 2085 | 197336182 | ATP-dependent DNA helicase DinG | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein