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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | VSAL_I1166 | 1270324..1271517 [-], 1194 | 209694714 | transposase | |
2 | VSAL_I1168 (vasV-1) | 1272188..1272484 [+], 297 | 209694715 | type VI secretion protein VasV-1, PAAR domain protein | PAAR |
3 | VSAL_I1169 (vasJ-1) | 1272880..1274265 [+], 1386 | 209694716 | type VI secretion protein VasJ-1 | TssA |
4 | VSAL_I1170 (hcp-3) | 1274426..1274818 [+], 393 | 209694717 | hemolysin-coregulated protein Hcp-3 | TssD |
5 | VSAL_I1171 (vasQ-1) | 1274890..1275399 [+], 510 | 209694718 | type VI secretion protein VasQ-1 | TssB |
6 | VSAL_I1172 (vasRA-1) | 1275399..1276880 [+], 1482 | 209694719 | type VI secretion protein VasRA-1 | TssC |
7 | VSAL_I1173 (vasRB-1) | 1276930..1278291 [+], 1362 | 209694720 | type VI secretion protein VasRB-1 | TssC |
8 | VSAL_I1174 (vasS-1) | 1278288..1278710 [+], 423 | 209694721 | type VI secretion protein VasS-1 | TssE |
9 | VSAL_I1175 (vasA-1) | 1278703..1280484 [+], 1782 | 209694722 | type VI secretion protein VasA-1 | TssF |
10 | VSAL_I1176 (vasB-1) | 1280466..1281449 [+], 984 | 209694723 | type VI secretion protein VasB-1 | TssG |
11 | VSAL_I1177 (vasG-1) | 1281456..1284074 [+], 2619 | 209694724 | chaperone ClpB-1 | TssH |
12 | VSAL_I1178 (vasV-1) | 1284155..1284313 [+], 159 | 209694725 | type VI secretion protein VasV-1 | |
13 | VSAL_I1179 (vasC-1) | 1284376..1285320 [+], 945 | 209694726 | type VI secretion protein VasC-1 | Fha |
14 | VSAL_I1180 (vasD-1) | 1285317..1285781 [+], 465 | 209694727 | type VI secretion protein VasD-1 | TssJ |
15 | VSAL_I1181 (vasE-1) | 1285784..1287100 [+], 1317 | 209694728 | type VI secretion protein VasE-1 | TssK |
16 | VSAL_I1182 (vasF-1) | 1287108..1288232 [+], 1125 | 209694729 | type VI secretion protein VasF-1 | TssL |
17 | VSAL_I1184 | 1290747..1292054 [+], 1308 | 209694730 | transposase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein