 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | ABBFA_002219 | 2362265..2363443 [-], 1179 | 215483896 | Cyanate transport protein cynX | |
2 | ABBFA_002220 | 2363443..2363925 [-], 483 | 215483897 | guanine deaminase(guanase) | |
3 | ABBFA_002221 | 2363941..2364609 [-], 669 | 215483898 | Ankyrin repeat family protein | |
4 | ABBFA_002222 | 2364761..2365612 [+], 852 | 215483899 | regulatory helix-turn-helix protein, lysR family protein | |
5 | ABBFA_002223 | 2365615..2366343 [-], 729 | 215483900 | L-alanyl-D-glutamate peptidase | |
6 | ABBFA_002224 | 2366577..2366975 [-], 399 | 215483901 | hypothetical protein | |
7 | ABBFA_002225 | 2367193..2367999 [-], 807 | 215483902 | hypothetical protein | TssL |
8 | ABBFA_002226 | 2368017..2369381 [-], 1365 | 215483903 | hypothetical protein | TssK |
9 | ABBFA_002227 | 2369398..2370492 [-], 1095 | 215483904 | ImpA-related N-terminal family protein | TssA |
10 | ABBFA_002228 (clpV) | 2370516..2373197 [-], 2682 | 215483905 | type VI secretion ATPase, ClpV1 family | TssH |
11 | ABBFA_002229 | 2373416..2373679 [-], 264 | 215483906 | PAAR motif family protein | PAAR |
12 | ABBFA_002230 | 2373696..2374463 [-], 768 | 215483907 | inner membrane lipoprotein yiaD precursor | TagL |
13 | ABBFA_002231 | 2374466..2375425 [-], 960 | 215483908 | hypothetical protein | |
14 | ABBFA_002232 | 2375463..2379287 [-], 3825 | 215483909 | ImcF-related family protein | TssM |
15 | ABBFA_002233 | 2379318..2380730 [-], 1413 | 215483910 | hypothetical protein | |
16 | ABBFA_002234 | 2380727..2381725 [-], 999 | 215483911 | hypothetical protein | TssG |
17 | ABBFA_002235 | 2381689..2383500 [-], 1812 | 215483912 | hypothetical protein | TssF |
18 | ABBFA_002236 | 2383517..2383993 [-], 477 | 215483913 | lysozyme | TssE |
19 | ABBFA_002237 | 2384073..2384576 [-], 504 | 215483914 | type VI secretion system effector, Hcp1 family protein | TssD |
20 | ABBFA_002238 | 2384626..2386107 [-], 1482 | 215483915 | hypothetical protein | TssC |
21 | ABBFA_002239 | 2386100..2386603 [-], 504 | 215483916 | hypothetical protein | TssB |
22 | ABBFA_002240 | 2386620..2387312 [-], 693 | 215483917 | hypothetical protein | |
23 | ABBFA_002241 | 2388401..2388802 [+], 402 | 215483918 | hypothetical protein | |
24 | ABBFA_002242 | 2388824..2388940 [+], 117 | 215483919 | hypothetical protein | |
25 | ABBFA_002243 | 2388898..2389842 [+], 945 | 215483920 | Taurine transport system permease protein tauC | |
26 | ABBFA_002244 | 2389842..2390723 [+], 882 | 215483921 | nitrate transport ATP-binding protein nrtD | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein