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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | EFER_1956 | 2004648..2004971 [+], 324 | 218549294 | phage integrase | |
2 | EFER_1957 | 2005212..2005358 [-], 147 | 218549295 | hypothetical protein | |
3 | EFER_1958 | 2005536..2005895 [-], 360 | 218549296 | hypothetical protein | |
4 | EFER_1959 | 2005907..2006371 [-], 465 | 218549297 | hypothetical protein | |
5 | EFER_1960 | 2007155..2007604 [-], 450 | 218549298 | hypothetical protein | |
6 | EFER_1961 | 2007604..2008275 [-], 672 | 218549299 | hypothetical protein | |
7 | EFER_1962 | 2008475..2008954 [-], 480 | 218549300 | hypothetical protein | TssD |
8 | EFER_1963 | 2008972..2010477 [-], 1506 | 218549301 | hypothetical protein | TssA |
9 | EFER_1964 | 2010341..2013862 [-], 3522 | 218549302 | IcmF-like protein | TssM |
10 | EFER_1965 | 2013881..2015314 [-], 1434 | 218549303 | hypothetical protein | TssA |
11 | EFER_1966 | 2015317..2016060 [-], 744 | 218549304 | hypothetical protein | |
12 | EFER_1967 | 2016057..2018783 [-], 2727 | 218549305 | ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity | TssH |
13 | EFER_1968 | 2018792..2019601 [-], 810 | 218549306 | membrane protein Aec26 | TssL |
14 | EFER_1969 | 2019594..2021051 [-], 1458 | 218549307 | hypothetical protein | TssK |
15 | EFER_1970 | 2020952..2021485 [-], 534 | 218549308 | hypothetical protein | TssJ |
16 | EFER_1971 | 2021482..2022762 [-], 1281 | 218549309 | hypothetical protein | Fha |
17 | EFER_1972 | 2022786..2023823 [-], 1038 | 218549310 | hypothetical protein | TssG |
18 | EFER_1973 | 2023787..2025619 [-], 1833 | 218549311 | hypothetical protein | TssF |
19 | EFER_1974 | 2025625..2026062 [-], 438 | 218549312 | hypothetical protein | TssE |
20 | EFER_1975 | 2026065..2027546 [-], 1482 | 218549313 | hypothetical protein | TssC |
21 | EFER_1976 | 2027561..2028160 [-], 600 | 218549314 | hypothetical protein | TssB |
22 | EFER_1977 | 2028690..2029271 [+], 582 | 218549315 | hypothetical protein | TssD |
23 | EFER_1978 | 2029481..2031427 [+], 1947 | 218549316 | hypothetical protein | TssI |
24 | EFER_1979 | 2031449..2031868 [+], 420 | 218549317 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein