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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | RSKD131_3633 | 553652..554674 [+], 1023 | 221369470 | hypothetical protein | |
2 | RSKD131_3634 | 554667..555758 [+], 1092 | 221369471 | 3-oxoacyl-(acyl carrier protein) synthase | |
3 | RSKD131_3635 | 555755..556756 [+], 1002 | 221369472 | hypothetical protein | |
4 | RSKD131_3636 | 556753..557532 [+], 780 | 221369473 | hypothetical protein | |
5 | RSKD131_3637 | 557555..558241 [+], 687 | 221369474 | hypothetical protein | |
6 | RSKD131_3638 | 558238..558636 [-], 399 | 221369475 | hypothetical protein | |
7 | RSKD131_3639 | 558629..561298 [-], 2670 | 221369476 | ATPase AAA-2 domain protein precursor | TssH |
8 | RSKD131_3640 | 561412..563418 [+], 2007 | 221369477 | Serine/threonine protein kinase | |
9 | RSKD131_3641 | 563494..564588 [+], 1095 | 221369478 | ImpA domain protein | TssA |
10 | RSKD131_3642 | 564607..565137 [+], 531 | 221369479 | hypothetical protein | TssB |
11 | RSKD131_3643 | 565134..566651 [+], 1518 | 221369480 | hypothetical protein | TssC |
12 | RSKD131_3644 | 566703..567194 [+], 492 | 221369481 | hypothetical protein | TssD |
13 | RSKD131_3645 | 567227..567934 [+], 708 | 221369482 | hypothetical protein | TssE |
14 | RSKD131_3646 | 567931..569799 [+], 1869 | 221369483 | hypothetical protein | TssF |
15 | RSKD131_3647 | 569898..570761 [+], 864 | 221369484 | hypothetical protein | TssG |
16 | RSKD131_3648 | 570755..571984 [+], 1230 | 221369485 | FHA domain containing protein precursor | Fha |
17 | RSKD131_3649 | 571992..572429 [+], 438 | 221369486 | hypothetical protein | TssJ |
18 | RSKD131_3650 | 572438..573766 [+], 1329 | 221369487 | hypothetical protein | TssK |
19 | RSKD131_3651 | 573831..575192 [+], 1362 | 221369488 | OmpA/MotB domain protein precursor | TssL |
20 | RSKD131_3652 | 575193..578714 [+], 3522 | 221369489 | ImcF domain protein precursor | TssM |
21 | RSKD131_3653 | 578704..579195 [+], 492 | 221369490 | hypothetical protein | |
22 | RSKD131_3654 | 579206..581509 [-], 2304 | 221369491 | Rhs element Vgr protein | TssI |
23 | RSKD131_3655 | 581526..583934 [-], 2409 | 221369492 | hypothetical protein | TssM |
24 | RSKD131_3656 | 583934..584782 [-], 849 | 221369493 | hypothetical protein | |
25 | RSKD131_3657 | 584786..585532 [-], 747 | 221369494 | Protein phosphatase 2C domain protein | |
26 | RSKD131_3658 | 585675..586439 [+], 765 | 221369495 | OmpA/MotB domain protein precursor | TagL |
27 | RSKD131_3659 | 586436..587362 [-], 927 | 221369496 | hypothetical protein | |
28 | RSKD131_3660 | 587359..587769 [-], 411 | 221369497 | hypothetical protein | |
29 | RSKD131_3661 | 587769..588842 [-], 1074 | 221369498 | Zinc carboxypeptidase A metalloprotease | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein