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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Avin_26560 | 2717511..2718143 [-], 633 | 226944734 | hypothetical protein | |
2 | Avin_26570 | 2718194..2719225 [-], 1032 | 226944735 | Pentapeptide repeat-containing protein | |
3 | Avin_26580 | 2719249..2721867 [-], 2619 | 226944736 | Pentapeptide repeat-containing protein | |
4 | Avin_26590 | 2721869..2722219 [-], 351 | 226944737 | hypothetical protein | |
5 | Avin_26600 | 2722432..2724495 [-], 2064 | 226944738 | Rhs element Vgr protein | TssI |
6 | Avin_26610 | 2724500..2727160 [-], 2661 | 226944739 | ClpA/B-type protease | TssH |
7 | Avin_26620 | 2727153..2728166 [-], 1014 | 226944740 | hypothetical protein | TssG |
8 | Avin_26630 | 2728190..2730052 [-], 1863 | 226944741 | hypothetical protein | TssF |
9 | Avin_26640 | 2730052..2730594 [-], 543 | 226944742 | hypothetical protein | TssE |
10 | Avin_26650 | 2730697..2731179 [-], 483 | 226944743 | hypothetical protein | TssD |
11 | Avin_26660 | 2731238..2732740 [-], 1503 | 226944744 | hypothetical protein | TssC |
12 | Avin_26670 | 2732754..2733320 [-], 567 | 226944745 | hypothetical protein | TssB |
13 | Avin_26680 | 2733396..2734430 [-], 1035 | 226944746 | ImpA domain-containing protein | TssA |
14 | Avin_26690 | 2734439..2736217 [-], 1779 | 226944747 | Protein kinase | |
15 | Avin_26700 | 2736217..2736915 [-], 699 | 226944748 | hypothetical protein | |
16 | Avin_26710 | 2736912..2740529 [-], 3618 | 226944749 | hypothetical protein | TssM |
17 | Avin_26720 | 2740526..2741818 [-], 1293 | 226944750 | hypothetical protein | TssL |
18 | Avin_26730 | 2741800..2743167 [-], 1368 | 226944751 | hypothetical protein | TssK |
19 | Avin_26740 | 2743164..2743742 [-], 579 | 226944752 | hypothetical protein | TssJ |
20 | Avin_26760 | 2744129..2744449 [+], 321 | 226944753 | hypothetical protein | |
21 | Avin_26770 | 2744487..2746184 [+], 1698 | 226944754 | hypothetical protein | Fha |
22 | Avin_26780 | 2746166..2746936 [+], 771 | 226944755 | protein phosphatase 2C-like protein | |
23 | Avin_26790 | 2747055..2747411 [+], 357 | 226944756 | hypothetical protein | |
24 | Avin_26800 | 2747419..2747910 [+], 492 | 226944757 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein