 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Avin_50690 (modG) | 5137140..5137568 [+], 429 | 226947059 | Mo processing, homeostasis | |
2 | Avin_50700 | 5137651..5138601 [+], 951 | 226947060 | ABC transporter ATP-binding protein | |
3 | Avin_50710 | 5138555..5139448 [-], 894 | 226947061 | ABC type tungstate transporter, permease | |
4 | Avin_50720 | 5139591..5140286 [-], 696 | 226947062 | ABC transporter permease | |
5 | Avin_50730 (modA3) | 5140283..5141059 [-], 777 | 226947063 | molybdate ABC transporter substrate-binding protein | |
6 | Avin_50750 | 5141501..5142592 [-], 1092 | 226947064 | ImpA-like protein | TssA |
7 | Avin_50760 | 5142608..5146426 [-], 3819 | 226947065 | hypothetical protein | TssM |
8 | Avin_50770 | 5146423..5147187 [-], 765 | 226947066 | hypothetical protein | TssL |
9 | Avin_50780 | 5147205..5148530 [-], 1326 | 226947067 | hypothetical protein | TssK |
10 | Avin_50790 | 5148576..5149073 [-], 498 | 226947068 | hypothetical protein | |
11 | Avin_50800 | 5149261..5149824 [+], 564 | 226947069 | hypothetical protein | TssB |
12 | Avin_50810 | 5149857..5151338 [+], 1482 | 226947070 | hypothetical protein | TssC |
13 | Avin_50820 | 5151416..5151913 [+], 498 | 226947071 | hypothetical protein | TssD |
14 | Avin_50830 | 5151929..5152381 [+], 453 | 226947072 | hypothetical protein | TssE |
15 | Avin_50840 | 5152365..5154158 [+], 1794 | 226947073 | hypothetical protein | TssF |
16 | Avin_50850 | 5154122..5155144 [+], 1023 | 226947074 | hypothetical protein | TssG |
17 | Avin_50860 | 5155147..5157675 [+], 2529 | 226947075 | AAA ATPase | TssH |
18 | Avin_50870 | 5158418..5160424 [+], 2007 | 226947076 | Rhs element Vgr protein | TssI |
19 | Avin_50880 | 5160435..5160980 [+], 546 | 226947077 | hypothetical protein | |
20 | Avin_50890 | 5160977..5161309 [-], 333 | 226947078 | hypothetical protein | |
21 | Avin_50900 | 5161556..5161951 [-], 396 | 226947079 | nitrogen fixation-like protein | |
22 | Avin_50910 (nafY) | 5161948..5162679 [-], 732 | 226947080 | nitrogen fixation-like protein subunit gamma | |
23 | Avin_50920 (rnfH) | 5162704..5162964 [-], 261 | 226947081 | RnfABCDGE type electron transport complex subunit H | |
24 | Avin_50930 (rnfE1) | 5162986..5163702 [-], 717 | 226947082 | RnfABCDGE type electron transport complex subunit E | |
25 | Avin_50940 (rnfG1) | 5163716..5164405 [-], 690 | 226947083 | RnfABCDGE type electron transport complex subunit G | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein