 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Vapar_0191 | 198109..199296 [+], 1188 | 239813210 | fumarylacetoacetate (FAA) hydrolase | |
2 | Vapar_0192 | 199429..200520 [+], 1092 | 239813211 | ImpA family type VI secretion-associated protein | TssA |
3 | Vapar_0193 | 200601..201170 [+], 570 | 239813212 | type VI secretion protein | TssB |
4 | Vapar_0194 | 201189..202697 [+], 1509 | 239813213 | EvpB family type VI secretion protein | TssC |
5 | Vapar_0195 | 202747..203229 [+], 483 | 239813214 | hypothetical protein | TssD |
6 | Vapar_0196 | 203343..204209 [+], 867 | 239813215 | virulence protein SciE type | TagJ |
7 | Vapar_0197 | 204239..204766 [+], 528 | 239813216 | type VI secretion system lysozyme-like protein | TssE |
8 | Vapar_0198 | 204767..206638 [+], 1872 | 239813217 | type VI secretion protein | TssF |
9 | Vapar_0199 | 206635..207801 [+], 1167 | 239813218 | type VI secretion protein | TssG |
10 | Vapar_0200 | 207798..210524 [+], 2727 | 239813219 | type VI secretion ATPase, ClpV1 family | TssH |
11 | Vapar_0201 | 210545..212878 [+], 2334 | 239813220 | type VI secretion system Vgr family protein | TssI |
12 | Vapar_0202 | 213018..213347 [+], 330 | 239813221 | hypothetical protein | |
13 | Vapar_0203 | 213347..216007 [+], 2661 | 239813222 | pentapeptide repeat-containing protein | |
14 | Vapar_0204 | 216004..217080 [+], 1077 | 239813223 | pentapeptide repeat-containing protein | |
15 | Vapar_0205 | 217178..217798 [+], 621 | 239813224 | hypothetical protein | |
16 | Vapar_0206 | 217824..218210 [+], 387 | 239813225 | hypothetical protein | |
17 | Vapar_0207 | 218230..219039 [-], 810 | 239813226 | protein serine/threonine phosphatase | |
18 | Vapar_0208 | 219032..220969 [-], 1938 | 239813227 | FHA domain containing protein | Fha |
19 | Vapar_0209 | 221013..221417 [-], 405 | 239813228 | hypothetical protein | |
20 | Vapar_0210 | 221594..222064 [+], 471 | 239813229 | type VI secretion lipoprotein | TssJ |
21 | Vapar_0211 | 222227..223603 [+], 1377 | 239813230 | type VI secretion protein | TssK |
22 | Vapar_0212 | 223612..224994 [+], 1383 | 239813231 | hypothetical protein | TssL |
23 | Vapar_0213 | 224994..228629 [+], 3636 | 239813232 | type VI secretion protein IcmF | TssM |
24 | Vapar_0214 | 228631..229356 [+], 726 | 239813233 | type VI secretion-associated protein | |
25 | Vapar_0215 | 229388..231559 [+], 2172 | 239813234 | serine/threonine protein kinase | |
26 | Vapar_0216 | 231588..233141 [-], 1554 | 239813235 | Mg chelatase subunit ChlI | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein