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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | NT05HA_1848 | 1833338..1834063 [-], 726 | 251793533 | PnuC transporter | |
2 | NT05HA_1849 | 1834225..1837083 [+], 2859 | 251793534 | RNA polymerase-associated protein RapA | |
3 | NT05HA_1850 | 1837086..1837745 [+], 660 | 251793535 | ribosomal large subunit pseudouridine synthase A | |
4 | NT05HA_1851 | 1837937..1838434 [+], 498 | 251793536 | type VI secretion protein | TssB |
5 | NT05HA_1852 | 1838456..1839940 [+], 1485 | 251793537 | type VI secretion protein, EvpB/family | TssC |
6 | NT05HA_1853 | 1839950..1840366 [+], 417 | 251793538 | type VI secretion system lysozyme-like protein | TssE |
7 | NT05HA_1854 | 1840367..1842118 [+], 1752 | 251793539 | type VI secretion protein | TssF |
8 | NT05HA_1855 | 1842082..1843080 [+], 999 | 251793540 | type VI secretion protein | TssG |
9 | NT05HA_1856 | 1843082..1843867 [+], 786 | 251793541 | hypothetical protein | Fha |
10 | NT05HA_1857 | 1843882..1844568 [+], 687 | 251793542 | type VI secretion lipoprotein, family | TssJ |
11 | NT05HA_1858 | 1844572..1845915 [+], 1344 | 251793543 | type VI secretion protein | TssK |
12 | NT05HA_1859 | 1845912..1846769 [+], 858 | 251793544 | VasF | TssL |
13 | NT05HA_1860 | 1846795..1847421 [+], 627 | 251793545 | hypothetical protein | |
14 | NT05HA_1861 | 1847423..1848850 [+], 1428 | 251793546 | hypothetical protein | |
15 | NT05HA_1862 | 1849033..1852530 [+], 3498 | 251793547 | type VI secretion protein IcmF | TssM |
16 | NT05HA_1863 | 1852725..1852856 [-], 132 | 251793548 | hypothetical protein | |
17 | NT05HA_1864 | 1853020..1856250 [+], 3231 | 251793549 | outer membrane autotransporter barrel | |
18 | NT05HA_1865 (ribB) | 1856357..1857001 [-], 645 | 251793550 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein