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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PC1_3234 | 3643142..3644059 [-], 918 | 253689600 | hypothetical protein | |
2 | PC1_3235 | 3644056..3645012 [-], 957 | 253689601 | hypothetical protein | |
3 | PC1_3236 | 3645164..3645943 [-], 780 | 253689602 | Ankyrin | |
4 | PC1_3237 | 3645943..3647313 [-], 1371 | 253689603 | PAAR repeat-containing protein | PAAR |
5 | PC1_3238 | 3647323..3649359 [-], 2037 | 253689604 | type VI secretion system Vgr family protein | TssI |
6 | PC1_3239 | 3649589..3650107 [-], 519 | 253689605 | Hcp1 family type VI secretion system effector | TssD |
7 | PC1_3240 | 3650646..3651998 [-], 1353 | 253689606 | Sel1 domain-containing protein repeat-containing protein | |
8 | PC1_3241 | 3652030..3653466 [-], 1437 | 253689607 | ImpA domain-containing protein | TssA |
9 | PC1_3242 | 3653515..3657012 [-], 3498 | 253689608 | type VI secretion protein IcmF | TssM |
10 | PC1_3243 | 3657037..3658461 [-], 1425 | 253689609 | type VI secretion-associated protein | TssA |
11 | PC1_3244 | 3658473..3659033 [-], 561 | 253689610 | type VI secretion-associated protein | |
12 | PC1_3245 | 3659033..3660571 [-], 1539 | 253689611 | Sigma 54 interacting domain-containing protein | |
13 | PC1_3246 | 3660574..3663171 [-], 2598 | 253689612 | type VI secretion ATPase, ClpV1 family | TssH |
14 | PC1_3247 | 3663185..3663961 [-], 777 | 253689613 | type IV / VI secretion system protein, DotU family | TssL |
15 | PC1_3248 | 3663977..3665314 [-], 1338 | 253689614 | type VI secretion protein | TssK |
16 | PC1_3249 | 3665317..3665838 [-], 522 | 253689615 | type VI secretion lipoprotein, VC_A0113 family | TssJ |
17 | PC1_3250 | 3665838..3667058 [-], 1221 | 253689616 | putative FHA domain-containing protein | Fha |
18 | PC1_3251 | 3667061..3668059 [-], 999 | 253689617 | type VI secretion protein | TssG |
19 | PC1_3252 | 3668023..3669789 [-], 1767 | 253689618 | type VI secretion protein | TssF |
20 | PC1_3253 | 3669792..3670223 [-], 432 | 253689619 | type VI secretion system lysozyme-like protein | TssE |
21 | PC1_3254 | 3670229..3671707 [-], 1479 | 253689620 | EvpB family type VI secretion protein | TssC |
22 | PC1_3255 | 3671740..3672243 [-], 504 | 253689621 | type VI secretion protein | TssB |
23 | PC1_3256 | 3673656..3676088 [+], 2433 | 253689622 | CRISPR-associated protein, Csm1 family | |
24 | PC1_3257 | 3676113..3676496 [+], 384 | 253689623 | CRISPR-associated protein, Csm2 family | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein