 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | TERTU_1635 | 1685189..1685872 [-], 684 | 254785734 | inner membrane protein YccA | |
2 | TERTU_1636 | 1686037..1686729 [-], 693 | 254785735 | ribonucleotide reductase, subunit alpha | |
3 | TERTU_1637 | 1686740..1688899 [-], 2160 | 254785736 | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent | |
4 | TERTU_1639 | 1689583..1690065 [+], 483 | 254785737 | type VI secretion system effector, Hcp1 family | TssD |
5 | TERTU_1640 | 1690279..1692273 [+], 1995 | 254785738 | type VI secretion system Vgr family protein | TssI |
6 | TERTU_1641 | 1692285..1692845 [+], 561 | 254785739 | hypothetical protein | |
7 | TERTU_1642 | 1692855..1693835 [+], 981 | 254785740 | hypothetical protein | |
8 | TERTU_1643 | 1693846..1694226 [+], 381 | 254785741 | hypothetical protein | |
9 | TERTU_1644 | 1694256..1695485 [+], 1230 | 254785742 | hypothetical protein | |
10 | TERTU_1645 | 1695501..1695794 [-], 294 | 254785743 | hypothetical protein | |
11 | TERTU_1646 | 1695815..1696363 [-], 549 | 254785744 | hypothetical protein | |
12 | TERTU_1647 | 1696428..1699229 [-], 2802 | 254785745 | hypothetical protein | |
13 | TERTU_1648 | 1699226..1700575 [-], 1350 | 254785746 | hypothetical protein | |
14 | TERTU_1649 (clpV) | 1700803..1703538 [-], 2736 | 254785747 | type VI secretion ATPase, ClpV1 family | TssH |
15 | TERTU_1650 | 1703569..1704684 [-], 1116 | 254785748 | type VI secretion protein | TssG |
16 | TERTU_1651 (vasA) | 1704648..1706483 [-], 1836 | 254785749 | type VI secretion protein | TssF |
17 | TERTU_1652 | 1706476..1706973 [-], 498 | 254785750 | type VI secretion system lysozyme-related protein | TssE |
18 | TERTU_1653 | 1706985..1708421 [-], 1437 | 254785751 | type VI secretion protein, EvpB/family | TssC |
19 | TERTU_1654 | 1708411..1708533 [+], 123 | 254785752 | hypothetical protein | |
20 | TERTU_1656 | 1708917..1710413 [-], 1497 | 254785753 | type VI secretion protein, EvpB/family | TssC |
21 | TERTU_1657 | 1710403..1710924 [-], 522 | 254785754 | type VI secretion protein | TssB |
22 | TERTU_1658 | 1710954..1712075 [-], 1122 | 254785755 | type VI secretion-associated protein, ImpA family | TssA |
23 | TERTU_1660 | 1712682..1714319 [+], 1638 | 254785756 | type VI secretion system FHA domain-containing protein | Fha |
24 | TERTU_1661 | 1714351..1714839 [+], 489 | 254785757 | type VI secretion lipoprotein | TssJ |
25 | TERTU_1662 | 1714855..1716189 [+], 1335 | 254785758 | type VI secretion protein | TssK |
26 | TERTU_1663 | 1716202..1717110 [+], 909 | 254785759 | type IV / VI secretion system protein, DotU family | TssL |
27 | TERTU_1664 (icmF) | 1717165..1720698 [+], 3534 | 254785760 | type VI secretion protein IcmF | TssM |
28 | TERTU_1665 | 1720698..1721462 [+], 765 | 254785761 | type VI secretion-associated protein, BMA_A0400 family | |
29 | TERTU_1666 | 1721455..1722204 [+], 750 | 254785762 | protein phosphatase 2C domain-containing protein | |
30 | TERTU_1667 | 1722211..1724004 [+], 1794 | 254785763 | protein kinase | |
31 | TERTU_1668 | 1724009..1724956 [+], 948 | 254785764 | protein kinase | |
32 | TERTU_1669 | 1724958..1725200 [+], 243 | 254785765 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein