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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | ECO103_3353 (csdA) | 3410370..3411575 [+], 1206 | 260845456 | cysteine sulfinate desulfinase CsdA | |
2 | ECO103_3354 (ygdK) | 3411575..3412018 [+], 444 | 260845457 | Fe-S metabolism protein | |
3 | ECO103_3355 (ygdL) | 3412069..3412875 [-], 807 | 260845458 | hypothetical protein | |
4 | ECO103_3356 (mltA) | 3412952..3414049 [-], 1098 | 260845459 | membrane-bound lytic murein transglycosylase A | |
5 | ECO103_3357 | 3415188..3415697 [+], 510 | 260845460 | hypothetical protein | TssB |
6 | ECO103_3358 | 3415746..3417284 [+], 1539 | 260845461 | hypothetical protein | TssC |
7 | ECO103_3359 | 3417302..3418639 [+], 1338 | 260845462 | hypothetical protein | TssK |
8 | ECO103_3360 | 3418636..3419301 [+], 666 | 260845463 | hypothetical protein | TssL |
9 | ECO103_3361 | 3419314..3420966 [+], 1653 | 260845464 | outer membrane lipoprotein | TagL |
10 | ECO103_3362 | 3421024..3421515 [+], 492 | 260845465 | Hcp-like protein | TssD |
11 | ECO103_3363 | 3421706..3424360 [+], 2655 | 260845466 | ATP-dependent Clp proteinase ATP-binding chain | TssH |
12 | ECO103_3364 | 3424372..3426879 [+], 2508 | 260845467 | hypothetical protein | TssI |
13 | ECO103_3365 | 3426901..3427494 [+], 594 | 260845468 | hypothetical protein | |
14 | ECO103_3366 | 3427598..3428047 [+], 450 | 260845469 | hypothetical protein | |
15 | ECO103_3367 | 3428125..3429339 [+], 1215 | 260845470 | hypothetical protein | |
16 | ECO103_3368 | 3429396..3432722 [+], 3327 | 260845471 | hypothetical protein | TssM |
17 | ECO103_3369 | 3432715..3434325 [+], 1611 | 260845472 | hypothetical protein | TssA |
18 | ECO103_3370 | 3434325..3435749 [+], 1425 | 260845473 | hypothetical protein | PAAR |
19 | ECO103_3371 | 3436724..3438484 [+], 1761 | 260845474 | hypothetical protein | TssF |
20 | ECO103_3372 | 3438448..3439527 [+], 1080 | 260845475 | hypothetical protein | TssG |
21 | ECO103_3373 | 3439508..3440044 [+], 537 | 260845476 | hypothetical protein | TssJ |
22 | ECO103_3374 | 3440048..3440476 [+], 429 | 260845477 | hypothetical protein | TssE |
23 | ECO103_3375 | 3440476..3441852 [+], 1377 | 260845478 | hypothetical protein | TssA |
24 | ECO103_3376 (amiC) | 3442811..3444064 [-], 1254 | 260845479 | N-acetylmuramoyl-L-alanine amidase | |
25 | ECO103_3377 (argA) | 3444296..3445627 [+], 1332 | 260845480 | fused acetylglutamate kinase homolog (inactive)/amino acid N-acetyltransferase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein