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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YPZ3_1330 | 1721618..1722370 [+], 753 | 294503440 | enoyl-CoA hydratase | |
2 | YPZ3_1331 | 1722373..1723161 [+], 789 | 294503441 | putative short chain dehydrogenase | |
3 | YPZ3_1332 | 1723356..1723688 [+], 333 | 294503442 | hypothetical protein | |
4 | YPZ3_1333 | 1724073..1724921 [+], 849 | 294503443 | putative acyl transferase | |
5 | YPZ3_1334 | 1725910..1726410 [+], 501 | 294503444 | hypothetical protein | TssB |
6 | YPZ3_1335 | 1726459..1727997 [+], 1539 | 294503445 | hypothetical protein | TssC |
7 | YPZ3_1336 | 1728114..1729361 [+], 1248 | 294503446 | hypothetical protein | TssK |
8 | YPZ3_1337 | 1729358..1730044 [+], 687 | 294503447 | hypothetical protein | TssL |
9 | YPZ3_1338 | 1730044..1731780 [+], 1737 | 294503448 | hypothetical protein | TagL |
10 | YPZ3_1339 | 1731784..1732275 [+], 492 | 294503449 | hypothetical protein | TssD |
11 | YPZ3_1340 (clpB3) | 1732693..1735341 [+], 2649 | 294503450 | Clp ATPase | TssH |
12 | YPZ3_1341 | 1735338..1737686 [+], 2349 | 294503451 | hypothetical protein | TssI |
13 | YPZ3_1342 | 1737701..1739923 [+], 2223 | 294503452 | hypothetical protein | |
14 | YPZ3_1343 | 1742016..1742651 [+], 636 | 294503453 | hypothetical protein | |
15 | YPZ3_1344 | 1742667..1744967 [+], 2301 | 294503454 | putative kinase | |
16 | YPZ3_1345 | 1744964..1745737 [+], 774 | 294503455 | hypothetical protein | |
17 | YPZ3_1346 | 1746167..1748350 [+], 2184 | 294503456 | hypothetical protein | |
18 | YPZ3_1347 | 1749726..1750046 [-], 321 | 294503457 | transposase | |
19 | YPZ3_1348 | 1751158..1752390 [+], 1233 | 294503458 | hypothetical protein | |
20 | YPZ3_1349 | 1752387..1755809 [+], 3423 | 294503459 | hypothetical protein | TssM |
21 | YPZ3_1350 | 1755853..1757454 [+], 1602 | 294503460 | hypothetical protein | TssA |
22 | YPZ3_1351 | 1757472..1758530 [+], 1059 | 294503461 | hypothetical protein | PAAR |
23 | YPZ3_1352 | 1758545..1759000 [+], 456 | 294503462 | hypothetical protein | |
24 | YPZ3_1353 | 1759221..1760984 [+], 1764 | 294503463 | hypothetical protein | TssF |
25 | YPZ3_1354 | 1760948..1762033 [+], 1086 | 294503464 | hypothetical protein | TssG |
26 | YPZ3_1355 | 1762008..1762589 [+], 582 | 294503465 | hypothetical protein | TssJ |
27 | YPZ3_1356 | 1762589..1763041 [+], 453 | 294503466 | hypothetical protein | TssE |
28 | YPZ3_1357 | 1763066..1764433 [+], 1368 | 294503467 | hypothetical protein | TssA |
29 | YPZ3_1358 | 1764645..1765268 [-], 624 | 294503468 | hypothetical protein | |
30 | YPZ3_1359 | 1765975..1767546 [+], 1572 | 294503469 | ABC transporter ATP-binding protein | |
31 | YPZ3_1360 | 1767774..1768427 [+], 654 | 294503470 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein