 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | ECL_01796 | 1814799..1815305 [-], 507 | 296102157 | thiol peroxidase | |
2 | ECL_01797 | 1815413..1816378 [+], 966 | 296102158 | mandelate racemase/muconate lactonizing protein | |
3 | ECL_01798 | 1816369..1817082 [-], 714 | 296102159 | murein peptide amidase A | |
4 | ECL_01799 | 1817265..1818881 [+], 1617 | 296102160 | putative transport periplasmic protein | |
5 | ECL_01800 | 1818962..1819087 [-], 126 | 296102161 | hypothetical protein | |
6 | ECL_01801 (impB) | 1819466..1819957 [+], 492 | 296102162 | type VI secretion system protein ImpB | TssB |
7 | ECL_01802 | 1819993..1821540 [+], 1548 | 296102163 | type VI secretion protein EvpB | TssC |
8 | ECL_01803 | 1821558..1822898 [+], 1341 | 296102164 | hypothetical protein | TssK |
9 | ECL_01804 | 1822895..1823587 [+], 693 | 296102165 | putative OmpA-family membrane protein | TssL |
10 | ECL_01805 | 1823680..1825107 [+], 1428 | 296102166 | OmpA/MotB domain-containing protein | TagL |
11 | ECL_01806 (vasG) | 1825059..1827341 [+], 2283 | 296102167 | type VI secretion system protein VasG | TssH |
12 | ECL_01809 | 1830562..1832409 [+], 1848 | 296102168 | hypothetical protein | |
13 | ECL_01810 | 1832427..1832921 [+], 495 | 296102169 | maltose transport system permease | |
14 | ECL_01811 | 1833017..1833250 [+], 234 | 296102170 | hypothetical protein | |
15 | ECL_01812 | 1833664..1834872 [+], 1209 | 296102171 | putative structural protein | |
16 | ECL_01813 (impL) | 1834869..1838342 [+], 3474 | 296102172 | type VI secretion system protein ImpL | TssM |
17 | ECL_01814 (vasJ) | 1838342..1839940 [+], 1599 | 296102173 | type VI secretion system protein VasJ | TssA |
18 | ECL_01815 | 1839974..1840165 [+], 192 | 296102174 | hypothetical protein | PAAR |
19 | ECL_01816 | 1840167..1841135 [+], 969 | 296102175 | putative IS903 transposase | |
20 | ECL_01817 (impG) | 1841208..1842659 [+], 1452 | 296102176 | type VI secretion system protein ImpG | TssF |
21 | ECL_01818 (impH) | 1842623..1843708 [+], 1086 | 296102177 | type VI secretion system protein ImpH | TssG |
22 | ECL_01819 (vasD) | 1843686..1844231 [+], 546 | 296102178 | type VI secretion system protein VasD | TssJ |
23 | ECL_01820 | 1844231..1844686 [+], 456 | 296102179 | type VI secretion system protein | TssE |
24 | ECL_01821 (vasL) | 1844710..1846026 [+], 1317 | 296102180 | type VI secretion system protein VasL | TssA |
25 | ECL_01822 | 1846145..1846624 [+], 480 | 296102181 | hypothetical protein | |
26 | ECL_01823 | 1846659..1847222 [-], 564 | 296102182 | putative intracellular protease/amidase | |
27 | ECL_01824 | 1847440..1847580 [-], 141 | 296102183 | hypothetical protein | |
28 | ECL_01825 | 1847655..1848887 [-], 1233 | 296102184 | PAS/PAC sensor-containing diguanylate cyclase | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein