 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | XNC1_4528 | 4332359..4332532 [+], 174 | 300725281 | hypothetical protein | |
2 | XNC1_4529 | 4332650..4333240 [+], 591 | 300725282 | hypothetical protein | |
3 | XNC1_4530 | 4333723..4333974 [-], 252 | 300725283 | hypothetical protein | |
4 | XNC1_4531 | 4333967..4334377 [-], 411 | 300725284 | transposase | |
5 | XNC1_4532 | 4334475..4334798 [-], 324 | 300725285 | transposase | |
6 | XNC1_4533 | 4334715..4335029 [+], 315 | 300725286 | hypothetical protein | |
7 | XNC1_4534 | 4335016..4335510 [+], 495 | 300725287 | hypothetical protein | |
8 | XNC1_4535 | 4335492..4336364 [+], 873 | 300725288 | transposase | |
9 | XNC1_4536 | 4336301..4336441 [+], 141 | 300725289 | transposase | |
10 | XNC1_4537 | 4336570..4336713 [+], 144 | 300725290 | transposase (fragment) | |
11 | XNC1_4538 | 4336814..4338214 [-], 1401 | 300725291 | hypothetical protein | TssA |
12 | XNC1_4539 | 4338297..4341902 [-], 3606 | 300725292 | hypothetical protein | TssM |
13 | XNC1_4540 | 4341899..4343341 [-], 1443 | 300725293 | hypothetical protein | TssA |
14 | XNC1_4541 | 4343347..4344018 [-], 672 | 300725294 | hypothetical protein | |
15 | XNC1_4542 | 4344015..4344812 [-], 798 | 300725295 | hypothetical protein | |
16 | XNC1_4544 | 4344812..4347547 [-], 2736 | 300725296 | ClpA/B-type chaperone | TssH |
17 | XNC1_4545 | 4347557..4348324 [-], 768 | 300725297 | hypothetical protein | TssL |
18 | XNC1_4546 | 4348327..4349679 [-], 1353 | 300725298 | hypothetical protein | TssK |
19 | XNC1_4547 | 4349682..4350236 [-], 555 | 300725299 | hypothetical protein | TssJ |
20 | XNC1_4548 | 4350220..4351515 [-], 1296 | 300725300 | hypothetical protein | Fha |
21 | XNC1_4549 | 4351521..4352573 [-], 1053 | 300725301 | hypothetical protein | TssG |
22 | XNC1_4550 | 4352537..4354369 [-], 1833 | 300725302 | hypothetical protein | TssF |
23 | XNC1_4551 | 4354370..4354810 [-], 441 | 300725303 | hypothetical protein | TssE |
24 | XNC1_4552 | 4354813..4356291 [-], 1479 | 300725304 | hypothetical protein | TssC |
25 | XNC1_4553 | 4356311..4356808 [-], 498 | 300725305 | hypothetical protein | TssB |
26 | XNC1_4554 (hcp) | 4357739..4358257 [+], 519 | 300725306 | hemolysin-coregulated protein Hcp | TssD |
27 | XNC1_4555 (xhlB) | 4358887..4360560 [+], 1674 | 300725307 | XhlB, XhlA hemolysin secretion/activation protein (TpsB) | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein