 |
| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | HDN1F_12020 | 1488400..1489599 [+], 1200 | 304310840 | Major facilitator superfamily protein | |
| 2 | HDN1F_12030 | 1489628..1489870 [+], 243 | 304310841 | hypothetical protein | |
| 3 | HDN1F_12040 | 1489914..1490891 [+], 978 | 304310842 | hypothetical protein | |
| 4 | HDN1F_12050 (katA) | 1490965..1492440 [-], 1476 | 304310843 | catalase | |
| 5 | HDN1F_12060 | 1492541..1493746 [-], 1206 | 304310844 | hypothetical protein | TssG |
| 6 | HDN1F_12070 | 1493887..1495713 [-], 1827 | 304310845 | hypothetical protein | TssF |
| 7 | HDN1F_12080 | 1495734..1496264 [-], 531 | 304310846 | hypothetical protein | TssE |
| 8 | HDN1F_12090 (hcP-2) | 1496299..1496793 [-], 495 | 304310847 | hypothetical protein | TssD |
| 9 | HDN1F_12100 | 1496869..1498737 [-], 1869 | 304310848 | hypothetical protein | TssC |
| 10 | HDN1F_12110 | 1498750..1502310 [-], 3561 | 304310849 | hypothetical protein | TssM |
| 11 | HDN1F_12120 | 1502338..1503051 [-], 714 | 304310850 | hypothetical protein | TssL |
| 12 | HDN1F_12130 | 1503097..1504488 [-], 1392 | 304310851 | hypothetical protein | TssK |
| 13 | HDN1F_12140 | 1504530..1505294 [-], 765 | 304310852 | hypothetical protein | TssJ |
| 14 | HDN1F_12150 | 1505371..1505889 [-], 519 | 304310853 | hypothetical protein | TssD |
| 15 | HDN1F_12160 | 1505977..1507449 [-], 1473 | 304310854 | hypothetical protein | TssC |
| 16 | HDN1F_12170 | 1507524..1508012 [-], 489 | 304310855 | hypothetical protein | TssB |
| 17 | HDN1F_12180 | 1508204..1508548 [-], 345 | 304310856 | hypothetical protein | |
| 18 | HDN1F_12190 | 1508606..1510456 [-], 1851 | 304310857 | sigma factor SigB regulation protein | |
| 19 | HDN1F_12200 | 1510460..1511710 [-], 1251 | 304310858 | hypothetical protein | |
| 20 | HDN1F_12210 (odc) | 1511721..1512884 [-], 1164 | 304310859 | Ornithine decarboxylase | |
| 21 | HDN1F_12220 | 1512895..1513674 [-], 780 | 304310860 | hypothetical protein | |
| 22 | HDN1F_12230 | 1513679..1515109 [-], 1431 | 304310861 | hypothetical protein | |
| 23 | HDN1F_12240 (pknB) | 1515106..1516398 [-], 1293 | 304310862 | hypothetical protein | |
| 24 | HDN1F_12250 | 1516474..1516887 [-], 414 | 304310863 | hypothetical protein | |
| 25 | HDN1F_12260 | 1516902..1517525 [-], 624 | 304310864 | hypothetical protein | |
| 26 | HDN1F_12270 | 1517530..1518612 [-], 1083 | 304310865 | hypothetical protein | |
| 27 | HDN1F_12280 | 1518609..1521458 [-], 2850 | 304310866 | hypothetical protein | |
| 28 | HDN1F_12290 | 1521464..1524319 [-], 2856 | 304310867 | hypothetical protein | TssI |
| 29 | HDN1F_12300 | 1524512..1526281 [-], 1770 | 304310868 | Sulphate anion transporter | |
| 30 | HDN1F_12310 | 1526440..1526745 [+], 306 | 304310869 | hypothetical protein | |
| 31 | HDN1F_12320 (hit) | 1526783..1527241 [-], 459 | 304310870 | diadenosine tetraphosphate (Ap4A) hydrolase | |
| 32 | HDN1F_12330 | 1527238..1528239 [-], 1002 | 304310871 | hypothetical protein | |
| 33 | HDN1F_12340 | 1528581..1528865 [+], 285 | 304310872 | hypothetical protein | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
SecReT6 ID
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein