 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Dda3937_00823 | 1569556..1569957 [+], 402 | 307130211 | hypothetical protein | |
2 | Dda3937_00822 | 1570055..1571092 [+], 1038 | 307130212 | hypothetical protein | |
3 | Dda3937_00821 | 1571103..1571450 [+], 348 | 307130213 | hypothetical protein | |
4 | Dda3937_00820 | 1571534..1571716 [-], 183 | 307130214 | hypothetical protein | |
5 | Dda3937_00819 | 1572150..1573313 [+], 1164 | 307130215 | peptidase M20D, amidohydrolase | |
6 | Dda3937_00818 | 1573440..1573739 [-], 300 | 307130216 | hypothetical protein | |
7 | Dda3937_04511 | 1573951..1574208 [-], 258 | 307130217 | hypothetical protein | |
8 | Dda3937_00817 | 1574284..1574787 [+], 504 | 307130218 | protein ImpB | TssB |
9 | Dda3937_00816 | 1574819..1576297 [+], 1479 | 307130219 | SciI protein | TssC |
10 | Dda3937_00815 | 1576304..1576735 [+], 432 | 307130220 | hypothetical protein | TssE |
11 | Dda3937_00814 | 1576738..1578504 [+], 1767 | 307130221 | hypothetical protein | TssF |
12 | Dda3937_00813 | 1578468..1579481 [+], 1014 | 307130222 | SciB protein | TssG |
13 | Dda3937_00812 | 1579418..1580698 [+], 1281 | 307130223 | hypothetical protein | Fha |
14 | Dda3937_00811 | 1580698..1581234 [+], 537 | 307130224 | lipoprotein | TssJ |
15 | Dda3937_00810 | 1581237..1582574 [+], 1338 | 307130225 | protein ImpJ | TssK |
16 | Dda3937_00809 | 1582591..1583367 [+], 777 | 307130226 | chemotaxis motB protein | TssL |
17 | Dda3937_00808 | 1583383..1586001 [+], 2619 | 307130227 | ClpB protein | TssH |
18 | Dda3937_00807 | 1586004..1587542 [+], 1539 | 307130228 | response regulator of zinc sigma-54-dependent two-component system | |
19 | Dda3937_00806 | 1587518..1588105 [+], 588 | 307130229 | hypothetical protein | |
20 | Dda3937_00805 | 1588093..1589556 [+], 1464 | 307130230 | hypothetical protein | TssA |
21 | Dda3937_00804 | 1589582..1593079 [+], 3498 | 307130231 | IcmF-like protein | TssM |
22 | Dda3937_00803 | 1593131..1594564 [+], 1434 | 307130232 | hypothetical protein | TssA |
23 | Dda3937_00802 | 1594634..1596001 [+], 1368 | 307130233 | hypothetical protein | |
24 | Dda3937_00801 | 1595895..1596956 [+], 1062 | 307130234 | hypothetical protein | |
25 | Dda3937_00800 | 1597050..1597910 [-], 861 | 307130235 | D-alanine aminotransferase | |
26 | Dda3937_00799 | 1597910..1598920 [-], 1011 | 307130236 | mandelate racemase/muconate lactonizing protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein