I. Summary

SecReT6 ID	415
Strain	Taylorella equigenitalis MCE9
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_014914
Location	730792..760855
Comment
Function	N/A
T6SS Type	Type i; subtype i3
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	1	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	0	1	1	1

III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	TEQUI_0704	725973..727445 [+], 1473	319778872	Potassium uptake protein TrkH
2	TEQUI_0705	727452..727922 [-], 471	319778873	tRNA (cytosine34-2'-O-)-methyltransferase
3	TEQUI_0706	727925..728470 [-], 546	319778874	phosphoribosyltransferase
4	TEQUI_0707	728674..729597 [+], 924	319778875	Biotin synthesis protein bioC
5	TEQUI_0708	730792..733617 [+], 2826	319778876	ClpB protein	TssH
6	TEQUI_0709	733765..736416 [-], 2652	319778877	hypothetical protein
7	TEQUI_0710	736531..737007 [-], 477	319778878	lipoprotein
8	TEQUI_0711	737237..737746 [+], 510	319778879	lipoprotein	TssJ
9	TEQUI_0712	737759..739111 [+], 1353	319778880	Uncharacterized protein ImpJ/VasE	TssK
10	TEQUI_0713	739119..740456 [+], 1338	319778881	Outer membrane protein ImpK/VasF, OmpA/MotB domain protein	TssL
11	TEQUI_0714	740468..744094 [+], 3627	319778882	IcmF-related protein	TssM
12	TEQUI_0715	744096..744818 [+], 723	319778883	Protein phosphatase ImpM
13	TEQUI_0716	744824..747520 [+], 2697	319778884	hypothetical protein
14	TEQUI_0717	747609..748670 [+], 1062	319778885	Uncharacterized protein ImpA	TssA
15	TEQUI_0718	748708..749241 [+], 534	319778886	Uncharacterized protein ImpB	TssB
16	TEQUI_0719	749250..750743 [+], 1494	319778887	Uncharacterized protein ImpC	TssC
17	TEQUI_0720	750811..751296 [+], 486	319778888	Uncharacterized protein ImpD	TssD
18	TEQUI_0721	751384..752217 [+], 834	319778889	Protein of avirulence locus ImpE	TagJ
19	TEQUI_0722	752228..752791 [+], 564	319778890	Uncharacterized protein ImpF	TssE
20	TEQUI_0723	752791..754686 [+], 1896	319778891	Protein ImpG/VasA	TssF
21	TEQUI_0724	754766..755470 [+], 705	319778892	hypothetical protein
22	TEQUI_0725	755548..758031 [-], 2484	319778893	TonB-dependent receptor
23	TEQUI_0726	758296..758916 [+], 621	319778894	hypothetical protein
24	TEQUI_0727	759311..760855 [+], 1545	319778895	VgrG protein	TssI
25	TEQUI_0728	760881..761747 [+], 867	319778896	hypothetical protein
26	TEQUI_0729	761760..764426 [+], 2667	319778897	hypothetical protein
27	TEQUI_0730	764429..765505 [+], 1077	319778898	hypothetical protein

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

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