 |
| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | Rahaq_4561 | 120526..122073 [+], 1548 | 322835243 | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor | |
| 2 | Rahaq_4562 | 122146..123693 [-], 1548 | 322835244 | methyl-accepting chemotaxis sensory transducer | |
| 3 | Rahaq_4563 | 124539..125033 [+], 495 | 322835245 | type VI secretion protein, VC_A0107 family | TssB |
| 4 | Rahaq_4564 | 125071..126612 [+], 1542 | 322835246 | type VI secretion protein, EvpB/VC_A0108 family | TssC |
| 5 | Rahaq_4565 | 126628..127977 [+], 1350 | 322835247 | type VI secretion protein, VC_A0114 family | TssK |
| 6 | Rahaq_4566 | 127974..128648 [+], 675 | 322835248 | type IV / VI secretion system protein, DotU family | TssL |
7 | Rahaq_4567 | 128650..130326 [+], 1677 | 322835249 | OmpA/MotB domain protein | TagL |
| 8 | Rahaq_4568 | 130359..130850 [+], 492 | 322835250 | type VI secretion system effector, Hcp1 family | TssD |
| 9 | Rahaq_4569 | 130947..133667 [+], 2721 | 322835251 | type VI secretion ATPase, ClpV1 family | TssH |
| 10 | Rahaq_4570 | 133664..136006 [+], 2343 | 322835252 | Rhs element Vgr protein | TssI |
| 11 | Rahaq_4571 | 136121..136636 [+], 516 | 322835253 | hypothetical protein | |
| 12 | Rahaq_4572 | 136653..140141 [+], 3489 | 322835254 | hypothetical protein | |
| 13 | Rahaq_4573 | 140157..140714 [+], 558 | 322835255 | hypothetical protein | |
| 14 | Rahaq_4574 | 140730..141179 [+], 450 | 322835256 | hypothetical protein | |
| 15 | Rahaq_4575 | 141207..141737 [+], 531 | 322835257 | hypothetical protein | |
16 | Rahaq_4576 | 141799..142062 [+], 264 | 322835258 | hypothetical protein | PAAR |
| 17 | Rahaq_4577 | 142065..143276 [+], 1212 | 322835259 | hypothetical protein | |
| 18 | Rahaq_4578 | 143273..146689 [+], 3417 | 322835260 | ImcF domain protein | TssM |
| 19 | Rahaq_4579 | 146789..148558 [+], 1770 | 322835261 | type VI secretion protein, VC_A0110 family | TssF |
| 20 | Rahaq_4580 | 148522..149604 [+], 1083 | 322835262 | type VI secretion protein, VC_A0111 family | TssG |
| 21 | Rahaq_4581 | 149668..150210 [+], 543 | 322835263 | type VI secretion lipoprotein, VC_A0113 family | TssJ |
| 22 | Rahaq_4582 | 150223..152745 [+], 2523 | 322835264 | Rhs element Vgr protein | TssI |
| 23 | Rahaq_4583 | 152761..154215 [+], 1455 | 322835265 | hypothetical protein | |
| 24 | Rahaq_4584 | 154215..155267 [+], 1053 | 322835266 | ImpA domain-containing protein | |
| 25 | Rahaq_4585 | 155355..156404 [+], 1050 | 322835267 | ImpA domain-containing protein | |
| 26 | Rahaq_4586 | 156494..157333 [+], 840 | 322835268 | hypothetical protein | |
| 27 | Rahaq_4587 | 157534..159138 [+], 1605 | 322835269 | type VI secretion-associated protein, VC_A0119 family | TssA |
| 28 | Rahaq_4588 | 159158..159589 [+], 432 | 322835270 | type VI secretion system lysozyme-related protein | TssE |
| 29 | Rahaq_4589 | 159534..159659 [-], 126 | 322835271 | hypothetical protein | |
| 30 | Rahaq_4590 | 159751..160560 [+], 810 | 322835272 | secreted protein | |
| 31 | Rahaq_4591 | 160643..162037 [+], 1395 | 322835273 | ImpA domain protein | TssA |
| 32 | Rahaq_4592 | 162087..162557 [+], 471 | 322835274 | hypothetical protein | |
| 33 | Rahaq_4593 | 163105..164529 [+], 1425 | 322835275 | cytochrome bd ubiquinol oxidase subunit I | |
| 34 | Rahaq_4594 | 164532..165539 [+], 1008 | 322835276 | cytochrome d ubiquinol oxidase, subunit II | |
| 35 | Rahaq_4595 | 165551..165715 [+], 165 | 322835277 | hypothetical protein | |
| 36 | Rahaq_4596 | 165949..166527 [-], 579 | 322835278 | TetR family transcriptional regulator | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
SecReT6 ID
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein