I. Summary

SecReT6 ID	433
Strain	Burkholderia gladioli BSR3
Replicon	chromosome I [Browse all T6SS(s) in this replicon]
Accession	NC_015381
Location	446062..466180
Comment
Function	N/A
T6SS Type	Type i; subtype i4b
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	0	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1

III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	bgla_1g04020	441401..442651 [+], 1251	330815347	transposase mutator type
2	bgla_1g04040	443949..444392 [+], 444	330815348	YiaAB two helix membrane protein
3	bgla_1g04050	444781..445965 [+], 1185	330815349	Diguanylate cyclase
4	bgla_1g04060	446062..446847 [-], 786	330815350	OmpA family protein	TssL
5	bgla_1g04070	446844..448190 [-], 1347	330815351	hypothetical protein	TssK
6	bgla_1g04080	448291..448908 [-], 618	330815352	Putative lipoprotein	TssJ
7	bgla_1g04090	449282..449953 [+], 672	330815353	TPR repeat protein
8	bgla_1g04100	449990..450508 [+], 519	330815354	hypothetical protein	TssB
9	bgla_1g04110	450524..452014 [+], 1491	330815355	hypothetical protein	TssC
10	bgla_1g04120	452091..452594 [+], 504	330815356	putative hemolysin-coregulated protein	TssD
11	bgla_1g04130	452683..453165 [+], 483	330815357	hypothetical protein	TssE
12	bgla_1g04140	453243..455081 [+], 1839	330815358	hypothetical protein	TssF
13	bgla_1g04150	455045..456142 [+], 1098	330815359	hypothetical protein	TssG
14	bgla_1g04160	456219..458894 [+], 2676	330815360	ClpA/B type protease	TssH
15	bgla_1g04170	459032..460186 [+], 1155	330815361	hypothetical protein	TssA
16	bgla_1g04180	460280..461317 [-], 1038	330815362	OmpA/MotB protein	TagL
17	bgla_1g04190	461322..462308 [-], 987	330815363	hypothetical protein
18	bgla_1g04200	462305..466180 [-], 3876	330815364	hypothetical protein	TssM
19	bgla_1g04210	466457..467308 [-], 852	330815365	Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
20	bgla_1g04220	467432..468487 [+], 1056	330815366	hypothetical protein
21	bgla_1g04230	468931..469962 [+], 1032	330815367	Mg2 and Co2 transporter
22	bgla_1g04240	470047..470199 [-], 153	330815368	hypothetical protein

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

Homology Effector list

BCAL0343

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	bgla_1g04120	452091..452594 [+], 504	330815356	putative hemolysin-coregulated protein	BCAL0343

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Proteins        Genes

N/A

N/A