SecReT6
I. Summary
SecReT6 ID448 insolico
StrainEnterobacter aerogenes KCTC 2190
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_015663
Location4432502..4450053
Comment
FunctionN/A
T6SS TypeType i; subtype i2
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number110121111
ComponentTssGTssJTssKTssM
Number0100
10
III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1EAE_206604429458..4430204 [+], 747336250608DeoR family transcriptional regulator 
2EAE_206654430218..4431300 [+], 1083336250609oxidoreductase domain-containing protein 
3EAE_206704431504..4431698 [+], 195336250610hypothetical protein 
4EAE_206754431870..4432436 [+], 567336250611Pfpi family intracellular protease 
5EAE_206804432502..4433842 [-], 1341336250612ImpA domain-containing protein  TssA
6EAE_206854433863..4434306 [-], 444336250613hypothetical protein  TssE
7EAE_206904434308..4435072 [-], 765336250614hypothetical protein  TssJ
8EAE_206954435073..4435642 [-], 570336250615hypothetical protein 
9EAE_207004435751..4436623 [-], 873336250616hypothetical protein 
10EAE_207154438176..4438748 [-], 573336250617hypothetical protein 
11EAE_207204438868..4441255 [-], 2388336250618hypothetical protein 
12EAE_207254441228..4441800 [-], 573336250619hypothetical protein 
13EAE_207304441983..4442168 [-], 186336250620hypothetical protein 
14EAE_207354442155..4442469 [-], 315336250621type VI secretion system protein ImpG  TssF
15EAE_207404442539..4444113 [-], 1575336250622hypothetical protein  TssA
16EAE_207454444113..4444448 [-], 336336250623ImpA family type VI secretion-associated protein  TssI
17EAE_207504444576..4447206 [-], 2631336250624type VI secretion ATPase, ClpV1 family protein  TssH
18EAE_207554447373..4447864 [-], 492336250625type VI secretion system effector  TssD
19EAE_207604447984..4449519 [-], 1536336250626type VI secretion protein EvpB  TssC
20EAE_207654449562..4450053 [-], 492336250627type VI secretion system protein ImpB  TssB
21EAE_207704450454..4451836 [-], 1383336250628putative porin 
22EAE_207754452420..4453874 [+], 1455336250629sugar (glycoside-Pentoside-Hexuronide) transporter 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 







Homology Effector list
EC042_4529

Effector identified
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  Homolog
1EAE_207554447373..4447864 [-], 492336250625type VI secretion system effector EC042_4529

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Proteins        Genes
N/A
N/A