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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PPS_2826 | 3142277..3142744 [-], 468 | 339487729 | hypothetical protein | |
2 | PPS_2827 | 3142780..3143364 [-], 585 | 339487730 | hypothetical protein | |
3 | PPS_2828 | 3143375..3145231 [-], 1857 | 339487731 | Rhs element Vgr protein | TssI |
4 | PPS_2829 | 3145893..3147401 [+], 1509 | 339487732 | hypothetical protein | |
5 | PPS_2830 | 3147515..3147694 [+], 180 | 339487733 | hypothetical protein | |
6 | PPS_2831 | 3148158..3148334 [+], 177 | 339487734 | hypothetical protein | |
7 | PPS_2832 | 3148740..3148967 [+], 228 | 339487735 | hypothetical protein | |
8 | PPS_2833 | 3150003..3150512 [+], 510 | 339487736 | hypothetical protein | |
9 | PPS_2834 | 3150821..3151993 [-], 1173 | 339487737 | ADP-ribosyl-(dinitrogen reductase) hydrolase | |
10 | PPS_2835 | 3152711..3153475 [+], 765 | 339487738 | hypothetical protein | |
11 | PPS_2836 | 3153504..3154079 [+], 576 | 339487739 | type VI secretion protein | TssB |
12 | PPS_2837 | 3154094..3155596 [+], 1503 | 339487740 | EvpB family type VI secretion protein | TssC |
13 | PPS_2838 | 3155623..3156105 [+], 483 | 339487741 | type VI secretion system lysozyme-like protein | TssE |
14 | PPS_2839 | 3156105..3157925 [+], 1821 | 339487742 | type VI secretion protein | TssF |
15 | PPS_2840 | 3157973..3158959 [+], 987 | 339487743 | type VI secretion protein | TssG |
16 | PPS_2841 | 3158956..3161541 [+], 2586 | 339487744 | type VI secretion ATPase | TssH |
17 | PPS_2842 | 3161566..3162288 [+], 723 | 339487745 | putative lipoprotein | TssJ |
18 | PPS_2843 | 3162285..3163628 [+], 1344 | 339487746 | type VI secretion protein | TssK |
19 | PPS_2844 | 3163625..3164341 [+], 717 | 339487747 | hypothetical protein | TssL |
20 | PPS_2845 | 3164372..3168175 [+], 3804 | 339487748 | ImcF domain-containing protein | TssM |
21 | PPS_2846 | 3168172..3169080 [+], 909 | 339487749 | hypothetical protein | |
22 | PPS_2847 | 3169077..3171572 [+], 2496 | 339487750 | OmpA/MotB domain-containing protein | TssM |
23 | PPS_2848 | 3171716..3172234 [+], 519 | 339487751 | Hcp1 family type VI secretion system effector | TssD |
24 | PPS_2849 | 3172330..3173427 [+], 1098 | 339487752 | ImpA family type VI secretion-associated protein | TssA |
25 | PPS_2850 | 3173582..3176098 [+], 2517 | 339487753 | excinuclease ABC subunit A | |
26 | PPS_2851 | 3176266..3176859 [+], 594 | 339487754 | hypothetical protein | |
27 | PPS_2852 | 3176977..3177852 [-], 876 | 339487755 | auxin efflux carrier | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein