I. Summary

SecReT6 ID	456
Strain	Enterobacter asburiae LF7a
Replicon	plasmid pENTAS01 [Browse all T6SS(s) in this replicon]
Accession	NC_015963
Location	122043..139735
Comment
Function	N/A
T6SS Type	Type i; subtype i4b
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	0	1	1	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1

III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	Entas_4609	117178..117948 [-], 771	345301716	Pili assembly chaperone
2	Entas_4610	118136..118687 [-], 552	345301717	Fimbrial protein domain-containing protein
3	Entas_4611	118760..119281 [-], 522	345301718	type I fimbrial protein, A chain
4	Entas_4612	119778..120362 [-], 585	345301719	integrase family protein
5	Entas_4613	120941..122056 [-], 1116	345301720	hypothetical protein
6	Entas_4614	122043..124577 [-], 2535	345301721	type VI secretion ATPase, ClpV1 family	TssH
7	Entas_4615	124597..128031 [-], 3435	345301722	hypothetical protein	TssM
8	Entas_4616	128040..128648 [-], 609	345301723	DotU family type IV / VI secretion system protein	TssL
9	Entas_4617	128651..130024 [-], 1374	345301724	type VI secretion protein	TssK
10	Entas_4618	130014..130673 [-], 660	345301725	hypothetical protein	TssJ
11	Entas_4619	130670..131734 [-], 1065	345301726	ImpA family type VI secretion-associated protein	TssA
12	Entas_4620	131738..132037 [-], 300	345301727	PAAR repeat-containing protein	PAAR
13	Entas_4621	132207..134048 [-], 1842	345301728	type VI secretion system Vgr family protein	TssI
14	Entas_4622	134051..135004 [-], 954	345301729	type VI secretion protein	TssG
15	Entas_4623	134995..136791 [-], 1797	345301730	type VI secretion protein	TssF
16	Entas_4624	136784..137197 [-], 414	345301731	gpW/GP25 family protein	TssE
17	Entas_4625	137251..137733 [-], 483	345301732	hypothetical protein
18	Entas_4626	137758..139239 [-], 1482	345301733	EvpB family type VI secretion protein	TssC
19	Entas_4627	139229..139735 [-], 507	345301734	type VI secretion protein	TssB
20	Entas_4629	140533..141273 [+], 741	345301735	integrase family protein
21	Entas_4630	141527..142537 [-], 1011	345301736	initiator RepB protein
22	Entas_4631	143294..144460 [+], 1167	345301737	Cobyrinic acid ac-diamide synthase

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

Download FASTA format files

Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

N/A

N/A

N/A