SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	457
Strain	Enterobacter asburiae LF7a
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_015968
Location	2064431..2094293
Comment
Function	N/A
T6SS Type	Type i; subtype i2
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	1	2	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	Entas_1915	2059952..2060575 [-], 624	345299081	glutathione S-transferase
2	Entas_1916	2060712..2061890 [-], 1179	345299082	major facilitator superfamily protein
3	Entas_1917	2061939..2063066 [-], 1128	345299083	hypothetical protein
4	Entas_1918	2063180..2064064 [+], 885	345299084	LysR family transcriptional regulator
5	Entas_1919	2064431..2064928 [+], 498	345299085	type VI secretion protein	TssB
6	Entas_1920	2064968..2066509 [+], 1542	345299086	EvpB family type VI secretion protein	TssC
7	Entas_1921	2066527..2067867 [+], 1341	345299087	type VI secretion protein	TssK
8	Entas_1922	2067864..2068553 [+], 690	345299088	DotU family type IV/VI secretion system protein	TssL
9	Entas_1923	2068550..2070256 [+], 1707	345299089	OmpA/MotB domain-containing protein	TagL
10	Entas_1924	2070261..2070752 [+], 492	345299090	Hcp1 family type VI secretion system effector	TssD
11	Entas_1925	2070926..2073580 [+], 2655	345299091	type VI secretion ATPase, ClpV1 family	TssH
12	Entas_1926	2073577..2075955 [+], 2379	345299092	Rhs element Vgr protein	TssI
13	Entas_1927	2075956..2076741 [+], 786	345299093	hypothetical protein
14	Entas_1928	2076799..2077329 [+], 531	345299094	hypothetical protein
15	Entas_1929	2077317..2077466 [+], 150	345299095	hypothetical protein
16	Entas_1930	2077563..2078096 [+], 534	345299096	hypothetical protein
17	Entas_1931	2078084..2078188 [+], 105	345299097	hypothetical protein
18	Entas_1933	2078850..2078999 [+], 150	345299098	hypothetical protein
19	Entas_1934	2079096..2079626 [+], 531	345299099	hypothetical protein
20	Entas_1935	2079614..2082061 [+], 2448	345299100	hypothetical protein
21	Entas_1936	2082080..2082337 [+], 258	345299101	PAAR repeat-containing protein	PAAR
22	Entas_1937	2082415..2083473 [+], 1059	345299102	hypothetical protein
23	Entas_1938	2083457..2086894 [+], 3438	345299103	ImcF domain-containing protein	TssM
24	Entas_1939	2086894..2088495 [+], 1602	345299104	type VI secretion-associated protein	TssA
25	Entas_1940	2088539..2090293 [+], 1755	345299105	type VI secretion protein	TssF
26	Entas_1941	2090257..2091342 [+], 1086	345299106	type VI secretion protein	TssG
27	Entas_1942	2091320..2091865 [+], 546	345299107	type VI secretion lipoprotein	TssJ
28	Entas_1943	2091865..2092320 [+], 456	345299108	type VI secretion system lysozyme-like protein	TssE
29	Entas_1944	2092335..2092805 [+], 471	345299109	hypothetical protein
30	Entas_1945	2092908..2094293 [+], 1386	345299110	ImpA domain-containing protein	TssA
31	Entas_1946	2094398..2095165 [-], 768	345299111	ABC transporter-like protein
32	Entas_1947	2095166..2096122 [-], 957	345299112	ABC transporter
33	Entas_1948	2096119..2097117 [-], 999	345299113	ABC transporter
34	Entas_1949	2097114..2098016 [-], 903	345299114	ABC transporter periplasmic protein

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

Homology Effector list

EC042_4529 , EC042_4529

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	Entas_1924	2070261..2070752 [+], 492	345299090	Hcp1 family type VI secretion system effector	EC042_4529
2	Entas_2063	2231243..2231725 [-], 483	345299225	Hcp1 family type VI secretion system effector	EC042_4529

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Proteins Genes

N/A