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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | XACM_2094 | 2398956..2399990 [+], 1035 | 346724995 | dehydrogenase | |
2 | XACM_2095 | 2400306..2400584 [-], 279 | 346724996 | hypothetical protein | |
3 | XACM_2096 | 2400914..2401876 [-], 963 | 346724997 | hypothetical protein | |
4 | XACM_2097 | 2402003..2402419 [-], 417 | 346724998 | hypothetical protein | |
5 | XACM_2098 | 2402560..2403066 [+], 507 | 346724999 | hypothetical protein | TssB |
6 | XACM_2099 | 2403071..2404579 [+], 1509 | 346725000 | hypothetical protein | TssC |
7 | XACM_2100 | 2404679..2405182 [+], 504 | 346725001 | hemolysin-coregulated protein | TssD |
8 | XACM_2101 | 2405215..2406048 [+], 834 | 346725002 | Protein of avirulence locus involved in temperature-dependent protein secretion | TagJ |
9 | XACM_2102 | 2406036..2406539 [+], 504 | 346725003 | hypothetical protein | TssE |
10 | XACM_2103 | 2406542..2408419 [+], 1878 | 346725004 | hypothetical protein | TssF |
11 | XACM_2104 | 2408383..2409393 [+], 1011 | 346725005 | hypothetical protein | TssG |
12 | XACM_2105 (clpB1) | 2409426..2412164 [+], 2739 | 346725006 | ATP-dependent Clp protease subunit | TssH |
13 | XACM_2106 | 2412817..2413365 [+], 549 | 346725007 | hypothetical protein | |
14 | XACM_2107 | 2413573..2414115 [+], 543 | 346725008 | hypothetical protein | |
15 | XACM_2108 | 2414488..2414724 [+], 237 | 346725009 | hypothetical protein | |
16 | XACM_2109 | 2414751..2414924 [+], 174 | 346725010 | hypothetical protein | |
17 | XACM_2110 | 2415105..2415674 [+], 570 | 346725011 | hypothetical protein | |
18 | XACM_2111 | 2415850..2417787 [+], 1938 | 346725012 | hypothetical protein | TssI |
19 | XACM_2112 | 2417796..2418335 [+], 540 | 346725013 | hypothetical protein | |
20 | XACM_2113 | 2418332..2419717 [+], 1386 | 346725014 | FHA-domain-containing protein | Fha |
21 | XACM_2114 | 2419714..2421051 [+], 1338 | 346725015 | hypothetical protein | TssK |
22 | XACM_2115 | 2421053..2422369 [+], 1317 | 346725016 | hypothetical protein | TssL |
23 | XACM_2116 | 2422373..2425831 [+], 3459 | 346725017 | hypothetical protein | TssM |
24 | XACM_2117 | 2425828..2426490 [+], 663 | 346725018 | hypothetical protein | |
25 | XACM_2118 | 2426487..2427209 [+], 723 | 346725019 | phosphoprotein phosphatase | |
26 | XACM_2119 | 2427206..2430109 [+], 2904 | 346725020 | serine/threonine kinase | |
27 | XACM_2120 | 2430106..2430432 [+], 327 | 346725021 | hypothetical protein | |
28 | XACM_2121 | 2430601..2431629 [-], 1029 | 346725022 | hypothetical protein | TssA |
29 | XACM_2122 | 2431638..2432609 [-], 972 | 346725023 | LysR family transcriptional regulator | |
30 | XACM_2123 (virA) | 2432723..2435155 [-], 2433 | 346725024 | two-component VirA-like sensor kinase | |
31 | XACM_2124 | 2435179..2436171 [-], 993 | 346725025 | Cytochrome c peroxidase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein