 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | FTL_RS05850 | 1091858..1092922 [+], 1065 | 489106285 | fructose-bisphosphate aldolase class II | |
2 | FTL_RS10420 | 1093090..1094543 [-], 1454 | pseudogene | alpha,alpha-trehalase | |
3 | FTL_RS05860 | 1094545..1094802 [-], 258 | 489106287 | hypothetical protein | |
4 | FTL_RS10425 | 1094950..1095830 [+], 881 | 499776592 | IS630 family transposase | |
5 | FTL_RS05875 | 1095831..1096703 [-], 873 | 499776609 | MFS transporter | |
6 | FTL_RS10895 | 1096688..1097410 [+], 723 | pseudogene | Pathogenicity determinant protein D | |
7 | FTL_RS05890 (tssB) | 1097491..1098045 [+], 555 | 489106300 | type VI secretion system contractile sheath small subunit | |
8 | FTL_RS05895 (tssC) | 1098059..1099579 [+], 1521 | 497717462 | type VI secretion system contractile sheath large subunit | |
9 | FTL_RS05900 | 1099596..1100225 [+], 630 | 489106304 | hypothetical protein | |
10 | FTL_RS05905 | 1100246..1101442 [+], 1197 | 499776611 | hypothetical protein | |
11 | FTL_RS05910 | 1101449..1102024 [-], 576 | 489106308 | hypothetical protein | |
12 | FTL_RS05915 (pdpC) | 1102042..1106028 [-], 3987 | 489106311 | pathogenicity determinant protein PdpC | |
13 | FTL_RS05920 | 1106068..1106841 [-], 774 | 489106314 | hypothetical protein | |
14 | FTL_RS05925 | 1106807..1107958 [-], 1152 | 489106318 | hypothetical protein | |
15 | FTL_RS05930 | 1107980..1108603 [-], 624 | 489106320 | DotU family type IV/VI secretion system protein | |
16 | FTL_RS05935 | 1108616..1110046 [-], 1431 | 489106321 | hypothetical protein | |
17 | FTL_RS05940 | 1110059..1110580 [-], 522 | 489106324 | DUF4280 domain-containing protein | |
18 | FTL_RS05945 | 1110648..1112312 [-], 1665 | 489106327 | hypothetical protein | |
19 | FTL_RS05950 | 1112317..1112811 [-], 495 | 489106331 | hypothetical protein | |
20 | FTL_RS05955 | 1112824..1113201 [-], 378 | 489108377 | hypothetical protein | |
21 | FTL_RS05960 | 1113191..1116472 [-], 3282 | 499776612 | hypothetical protein | |
22 | FTL_RS05965 | 1116477..1118939 [-], 2463 | 489106334 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein