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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | FTW_0530 | 516949..517829 [+], 881 | 134301594 | transposase ISFtu1 | |
2 | FTW_0533 (anmK) | 518843..519856 [+], 1014 | 134301595 | anhydro-N-acetylmuramic acid kinase | |
3 | FTW_0534 (pdpD2) | 520088..523675 [+], 3588 | 134301596 | pathogenicity determinant protein D, pdpD | PdpD |
4 | FTW_0535 (iglA2) | 523756..524310 [+], 555 | 134301597 | intracellular growth locus, iglA | IglA |
5 | FTW_0536 (iglB2) | 524324..525844 [+], 1521 | 134301598 | intracellular growth locus iglB | IglB |
6 | FTW_0537 (iglC2) | 525855..526490 [+], 636 | 134301599 | intracellular growth locus iglC | IglC |
7 | FTW_0538 (iglD2) | 526511..527707 [+], 1197 | 134301600 | intracellular growth locus iglD | IglD |
8 | FTW_0539 | 527714..528289 [-], 576 | 134301601 | hypothetical protein | PdpE |
9 | FTW_0540 (pdpC2) | 528307..532293 [-], 3987 | 134301602 | pathogenicity determinant protein pdpC2 | PdpC |
10 | FTW_0541 | 532333..533049 [-], 717 | 134301603 | hypothetical protein | IglJ |
11 | FTW_0542 | 533072..534223 [-], 1152 | 134301604 | hypothetical protein | IglI |
12 | FTW_0543 | 534245..534868 [-], 624 | 134301605 | hypothetical protein | DotU |
13 | FTW_0544 | 534881..536311 [-], 1431 | 134301606 | hypothetical protein | IglH |
14 | FTW_0545 | 536324..536845 [-], 522 | 134301607 | hypothetical protein | IglG |
15 | FTW_0546 | 536846..538576 [-], 1731 | 134301608 | hypothetical protein | IglF |
16 | FTW_0547 | 538581..539075 [-], 495 | 134301609 | hypothetical protein | VgrG |
17 | FTW_0548 | 539088..539465 [-], 378 | 134301610 | putative lipoprotein | IglE |
18 | FTW_0549 (pdpB2) | 539455..542736 [-], 3282 | 134301611 | pathogenicity determinant protein pdpB2 | PdpB |
19 | FTW_0550 (pdpA2) | 542741..545203 [-], 2463 | 134301612 | pathogenicity determinant protein, pdpA | PdpA |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein