SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	480
Strain	Francisella sp. TX077308
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_015696
Location	1949464..1974019
Comment
Function	N/A
T6SS Type	Type ii (Type FPI)
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	PdpA	PdpB	IglE	VgrG	IglF	IglG	IglH	DotU	IglI
Number	0	1	0	0	0	0	1	1	0
Component	IglJ	PdpC	PdpE	IglD	IglC	IglB	IglA	PdpD
Number	0	0	0	1	0	1	1	0


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	F7308_1892	1945150..1946088 [+], 939	337755905	hypothetical protein
2	F7308_1893	1946285..1946542 [+], 258	337755906	ISSod13, transposase
3	F7308_1894	1947069..1947848 [-], 780	337755907	hypothetical protein
4	F7308_1895	1948099..1948656 [-], 558	337755908	hypothetical protein
5	F7308_1896	1948750..1949043 [-], 294	337755909	hypothetical protein
6	F7308_1897	1949045..1949464 [-], 420	337755910	hypothetical protein
7	F7308_1898	1949464..1952604 [-], 3141	337755911	hypothetical protein	PdpB
8	F7308_1899	1952737..1954923 [-], 2187	337755912	hypothetical protein
9	F7308_1900	1955574..1956818 [-], 1245	337755913	hypothetical protein
10	F7308_1901	1956915..1957031 [-], 117	337755914	hypothetical protein
11	F7308_1902	1957063..1957599 [-], 537	337755915	hypothetical protein
12	F7308_1903	1957750..1957869 [-], 120	337755916	hypothetical protein
13	F7308_1904	1958298..1960016 [-], 1719	337755917	hypothetical protein
14	F7308_1905	1960102..1961457 [-], 1356	337755918	hypothetical protein
15	F7308_1906	1961489..1962025 [-], 537	337755919	hypothetical protein
16	F7308_1907	1962522..1962749 [-], 228	337755920	hypothetical protein
17	F7308_1908	1962947..1963327 [-], 381	337755921	hypothetical protein
18	F7308_1909	1963324..1963908 [-], 585	337755922	hypothetical protein
19	F7308_1910	1963920..1965962 [-], 2043	337755923	hypothetical protein
20	F7308_1911	1965964..1966581 [-], 618	337755924	hypothetical protein	DotU
21	F7308_1912	1966591..1968099 [-], 1509	337755925	hypothetical protein	IglH
22	F7308_1913	1968068..1968916 [-], 849	337755926	hypothetical protein
23	F7308_1914	1968935..1970158 [-], 1224	337755927	hypothetical protein	IglD
24	F7308_1915	1970192..1971247 [-], 1056	337755928	hypothetical protein
25	F7308_1916	1971256..1971897 [-], 642	337755929	hypothetical protein
26	F7308_1917	1971942..1973465 [-], 1524	337755930	hypothetical protein	IglB
27	F7308_1918	1973465..1974019 [-], 555	337755931	hypothetical protein	IglA
28	F7308_1919	1974086..1974214 [+], 129	337755932	hypothetical protein
29	F7308_1920	1974274..1974540 [+], 267	337755933	Thermostable carboxypeptidase 1
30	F7308_1921	1974547..1975416 [-], 870	337755934	aspartoacylase
31	F7308_1922	1975566..1976756 [+], 1191	337755935	tryptophan synthase subunit beta
32	F7308_1923	1976759..1977568 [+], 810	337755936	tryptophan synthase subunit alpha
33	F7308_1924	1977565..1978281 [-], 717	337755937	ribosyl nicotinamide transporter, PnuC-like protein

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

N/A