 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BC1002_4270 | 1163285..1164040 [-], 756 | 295699877 | hypothetical protein | |
2 | BC1002_4271 | 1164243..1165016 [-], 774 | 295699878 | short-chain dehydrogenase/reductase SDR | |
3 | BC1002_4273 | 1166191..1166433 [-], 243 | 295699879 | hypothetical protein | |
4 | BC1002_4274 | 1166479..1166610 [+], 132 | 295699880 | hypothetical protein | |
5 | BC1002_4276 | 1167294..1167887 [+], 594 | 295699881 | ParB-like nuclease | |
6 | BC1002_4277 | 1167901..1168422 [-], 522 | 295699882 | type VI secretion lipoprotein | TssJ |
7 | BC1002_4278 | 1168449..1169585 [-], 1137 | 295699883 | type VI secretion protein | TssG |
8 | BC1002_4279 | 1169582..1171396 [-], 1815 | 295699884 | type VI secretion protein | TssF |
9 | BC1002_4280 | 1171411..1172997 [-], 1587 | 295699885 | type VI secretion-associated protein | TssA |
10 | BC1002_4281 | 1172998..1176582 [-], 3585 | 295699886 | ImcF domain-containing protein | TssM |
11 | BC1002_4282 | 1176579..1177913 [-], 1335 | 295699887 | hypothetical protein | |
12 | BC1002_4285 | 1179632..1182163 [-], 2532 | 295699888 | chitinase-like protein | |
13 | BC1002_4286 | 1182172..1184508 [-], 2337 | 295699889 | Rhs element Vgr protein | TssI |
14 | BC1002_4287 | 1184595..1186166 [-], 1572 | 295699890 | type VI secretion protein EvpB | TssC |
15 | BC1002_4288 | 1186241..1186753 [-], 513 | 295699891 | type VI secretion protein | TssB |
16 | BC1002_4289 | 1187362..1188714 [+], 1353 | 295699892 | type VI secretion protein | TssK |
17 | BC1002_4290 | 1188714..1189445 [+], 732 | 295699893 | DotU family type IV / VI secretion system protein | TssL |
18 | BC1002_4291 | 1189513..1189746 [-], 234 | 295699894 | hypothetical protein | |
19 | BC1002_4292 | 1189956..1191188 [+], 1233 | 295699895 | OmpA/MotB domain-containing protein | TagL |
20 | BC1002_4293 | 1191291..1191776 [+], 486 | 295699896 | type VI secretion system effector | TssD |
21 | BC1002_4294 | 1191903..1194620 [+], 2718 | 295699897 | type VI secretion ATPase, ClpV1 family | TssH |
22 | BC1002_4295 | 1194635..1195060 [+], 426 | 295699898 | type VI secretion system lysozyme-like protein | TssE |
23 | BC1002_4296 | 1195403..1195729 [-], 327 | 295699899 | hypothetical protein | |
24 | BC1002_4297 | 1196394..1197686 [+], 1293 | 295699900 | sodium/hydrogen exchanger | |
25 | BC1002_4298 | 1198102..1198380 [+], 279 | 295699901 | hypothetical protein | |
26 | BC1002_4299 | 1198400..1199191 [+], 792 | 295699902 | phosphate ABC transporter substrate-binding protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein