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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BC1002_5441 | 2450472..2450621 [+], 150 | 295700987 | hypothetical protein | |
2 | BC1002_5442 | 2450713..2451405 [-], 693 | 295700988 | hypothetical protein | |
3 | BC1002_5443 | 2451737..2452141 [-], 405 | 295700989 | hypothetical protein | |
4 | BC1002_5444 | 2453895..2454431 [+], 537 | 295700990 | type VI secretion protein | TssB |
5 | BC1002_5445 | 2454514..2456022 [+], 1509 | 295700991 | type VI secretion protein EvpB | TssC |
6 | BC1002_5446 | 2456089..2456580 [+], 492 | 295700992 | hypothetical protein | TssD |
7 | BC1002_5447 | 2456648..2457085 [+], 438 | 295700993 | type VI secretion system lysozyme-like protein | TssE |
8 | BC1002_5448 | 2457105..2458862 [+], 1758 | 295700994 | type VI secretion protein | TssF |
9 | BC1002_5449 | 2458817..2459911 [+], 1095 | 295700995 | type VI secretion protein | TssG |
10 | BC1002_5450 | 2459923..2462655 [+], 2733 | 295700996 | type VI secretion ATPase, ClpV1 family | TssH |
11 | BC1002_5451 | 2462660..2464582 [+], 1923 | 295700997 | ImpA family type VI secretion-associated protein | TssI |
12 | BC1002_5452 | 2464591..2465322 [+], 732 | 295700998 | hypothetical protein | |
13 | BC1002_5453 | 2465325..2465711 [+], 387 | 295700999 | hypothetical protein | |
14 | BC1002_5454 | 2465725..2465967 [+], 243 | 295701000 | hypothetical protein | |
15 | BC1002_5455 | 2465981..2466967 [+], 987 | 295701001 | family 3 extracellular solute-binding protein | |
16 | BC1002_5456 | 2467005..2468279 [+], 1275 | 295701002 | sodium:dicarboxylate symporter | |
17 | BC1002_5457 | 2468289..2468990 [+], 702 | 295701003 | aspartate racemase | |
18 | BC1002_5458 | 2468987..2470411 [+], 1425 | 295701004 | sodium:dicarboxylate symporter | |
19 | BC1002_5459 | 2470408..2470908 [+], 501 | 295701005 | hypothetical protein | |
20 | BC1002_5460 | 2470905..2472239 [+], 1335 | 295701006 | type VI secretion protein | TssK |
21 | BC1002_5461 | 2472292..2473044 [+], 753 | 295701007 | type IV / VI secretion system, DotU | TssL |
22 | BC1002_5462 | 2473112..2477305 [+], 4194 | 295701008 | IcmF-like protein | TssM |
23 | BC1002_5463 | 2477302..2478444 [+], 1143 | 295701009 | type VI secretion-associated protein, ImpA family | TssA |
24 | BC1002_5464 | 2478511..2479407 [+], 897 | 295701010 | hypothetical protein | |
25 | BC1002_5465 | 2479574..2480539 [+], 966 | 295701011 | CMP/dCMP deaminase zinc-binding protein | |
26 | BC1002_5466 | 2480939..2481541 [-], 603 | 295701012 | phosphoesterase PA-phosphatase-like protein | |
27 | BC1002_5467 | 2481886..2482236 [+], 351 | 295701013 | hypothetical protein | |
28 | BC1002_5468 | 2482236..2482808 [+], 573 | 295701014 | methyltransferase type 12 | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein