SecReT6
I. Summary
SecReT6 ID503 insolico
StrainEnterobacter aerogenes EA1509E
Repliconchromosome [Browse all T6SS(s) in this replicon]
AccessionNC_020181
Location987040..990519
Comment
FunctionN/A
T6SS TypeType i; subtype i2
insolico Bioinformatics investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number110001100
ComponentTssGTssJTssKTssM
Number0000
III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
1ST548_p7319983218..984672 [-], 1455444351135Xyloside transporter XynT 
2ST548_p7318985263..986639 [+], 1377444351136Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) 
3ST548_p7317987040..987531 [+], 492444351137Uncharacterized protein ImpB  TssB
4ST548_p7316987568..989109 [+], 1542444351138Uncharacterized protein ImpC  TssC
5ST548_p7315989229..989720 [+], 492444351139Putative cytoplasmic protein USSDB7A  TssD
6ST548_p7314989887..990519 [+], 633444351140ClpB protein  TssH
7ST548_p7313990521..991471 [+], 951444351141hypothetical protein 
8ST548_p7312991537..992103 [-], 567444351142ThiJ/PfpI family protein 
9ST548_p7311992275..992469 [-], 195444351143FIG00731568: hypothetical protein 
10ST548_p7310992673..993755 [-], 1083444351144Oxidoreductase 
11ST548_p7309993769..994515 [-], 747444351145Glycerol-3-phosphate regulon repressor, DeoR family 
 
flank Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 







Homology Effector list
EC042_4529

Effector identified
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  Homolog
1ST548_p7315989229..989720 [+], 492444351139Putative cytoplasmic protein USSDB7A EC042_4529

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Proteins        Genes
N/A
N/A