 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BC1001_5629 | 2281728..2282360 [+], 633 | 323529911 | hypothetical protein | |
2 | BC1001_5630 | 2282526..2282789 [+], 264 | 323529912 | hypothetical protein | |
3 | BC1001_5631 | 2282909..2283841 [+], 933 | 323529913 | ornithine cyclodeaminase/mu-crystallin | |
4 | BC1001_5632 | 2284133..2285614 [+], 1482 | 323529914 | glucose-6-phosphate 1-dehydrogenase | |
5 | BC1001_5633 | 2285703..2286482 [-], 780 | 323529915 | type IV / VI secretion system protein, DotU family | TssL |
6 | BC1001_5634 | 2286479..2287825 [-], 1347 | 323529916 | type VI secretion protein | TssK |
7 | BC1001_5635 | 2287934..2288560 [-], 627 | 323529917 | type VI secretion lipoprotein | TssJ |
8 | BC1001_5636 | 2288944..2289630 [+], 687 | 323529918 | tetratricopeptide repeat-containing protein | |
9 | BC1001_5637 | 2289666..2290193 [+], 528 | 323529919 | type VI secretion protein | TssB |
10 | BC1001_5638 | 2290208..2291698 [+], 1491 | 323529920 | EvpB type VI secretion protein | TssC |
11 | BC1001_5639 | 2291772..2292275 [+], 504 | 323529921 | type VI secretion system effector, Hcp1 family | TssD |
12 | BC1001_5640 | 2292359..2292838 [+], 480 | 323529922 | type VI secretion system lysozyme-like protein | TssE |
13 | BC1001_5641 | 2292949..2294787 [+], 1839 | 323529923 | type VI secretion protein | TssF |
14 | BC1001_5642 | 2294751..2295845 [+], 1095 | 323529924 | type VI secretion protein | TssG |
15 | BC1001_5643 | 2295879..2298554 [+], 2676 | 323529925 | type VI secretion ATPase, ClpV1 family | TssH |
16 | BC1001_5644 | 2298590..2299708 [+], 1119 | 323529926 | type VI secretion-associated protein, ImpA family | TssA |
17 | BC1001_5645 | 2299807..2300772 [-], 966 | 323529927 | OmpA/MotB domain-containing protein | TagL |
18 | BC1001_5646 | 2300777..2301769 [-], 993 | 323529928 | type VI secretion-associated protein | |
19 | BC1001_5647 | 2301766..2305641 [-], 3876 | 323529929 | type VI secretion protein IcmF | TssM |
20 | BC1001_5648 | 2305915..2306760 [-], 846 | 323529930 | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin | |
21 | BC1001_5649 | 2306886..2307863 [+], 978 | 323529931 | hypothetical protein | |
22 | BC1001_5650 | 2308017..2309153 [+], 1137 | 323529932 | Inosine/uridine-preferring nucleoside hydrolase | |
23 | BC1001_5651 | 2309191..2310147 [-], 957 | 323529933 | LysR family transcriptional regulator | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein